New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6017090 | 64 (1.130) | 4 (0.070) | 3/252 | NT | 6.7% | coding (244/423 nt) | PP_5267 | cytochrome c5 |
? | NC_002947 | = 6017126 | 49 (0.890) | coding (208/423 nt) | PP_5267 | cytochrome c5 |
TGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAGGCGTTTGGCAATGTCGTCATTGGTCGCAGCGGTTGCGC > NC_002947/6016980‑6017272 | tGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCtt < 4:240109/147‑1 (MQ=255) tGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTg > 7:212002‑M2/1‑147 (MQ=255) gcggcATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTggc > 8:47813‑M2/1‑145 (MQ=255) gCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTg > 7:71547‑M2/1‑137 (MQ=255) gCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTg < 8:71547‑M2/138‑2 (MQ=255) gTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGAttt > 1:272195/1‑146 (MQ=255) gTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGAttt < 2:272195/146‑1 (MQ=255) aTACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCgg > 1:239498/1‑149 (MQ=255) cAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCgatga > 4:213726/1‑135 (MQ=255) cAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCgatga < 3:213726/135‑1 (MQ=255) cAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGtt > 5:260686/1‑149 (MQ=255) cAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGtt > 5:198258/1‑149 (MQ=255) tAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTg < 1:346492/149‑1 (MQ=255) tAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTg > 5:32211/1‑149 (MQ=255) tGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCt > 7:22576/1‑149 (MQ=255) gCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTcc > 6:121783/1‑149 (MQ=255) gCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTc < 6:260686/148‑1 (MQ=255) ccTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTTGCGATGATTTCATCCGGCGTTTTGGCTccc < 8:231955/149‑1 (MQ=255) cAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCAc > 4:205580/1‑149 (MQ=255) tGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCt < 3:205580/149‑1 (MQ=255) gCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTg > 7:75533/1‑149 (MQ=255) tCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTAGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCg < 6:221367/142‑1 (MQ=255) tCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTAGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCg > 5:221367/1‑142 (MQ=255) cGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCg > 7:288653/1‑143 (MQ=255) cGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCg < 8:288653/143‑1 (MQ=255) cGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACt < 4:168065/149‑1 (MQ=255) cccTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTc > 2:90916/1‑149 (MQ=255) cccTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTc > 8:26751/1‑149 (MQ=255) gtggtCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCAt < 1:90916/147‑1 (MQ=255) cgcgTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCAc < 7:26751/149‑1 (MQ=255) gcgTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACt > 3:253455/1‑149 (MQ=255) ttCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTc > 1:320368/1‑104 (MQ=255) ttCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTc < 2:320368/104‑1 (MQ=255) ccACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGccc < 3:312138/148‑1 (MQ=255) cgcgGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGcc > 6:339818/1‑118 (MQ=255) cggTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGcac < 5:121783/149‑1 (MQ=255) gtgtCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGc < 1:170744/136‑1 (MQ=255) gtgtCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGc > 2:170744/1‑136 (MQ=255) aCCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTgg < 4:253455/148‑1 (MQ=255) aCCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGc > 5:249548/1‑149 (MQ=255) aCCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCAGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGc > 7:62380/1‑149 (MQ=255) ccAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGc > 4:127242/1‑148 (MQ=255) aTTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAAc > 4:64338/1‑149 (MQ=255) aTTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAAc < 6:32211/149‑1 (MQ=255) tAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCAACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGc > 2:73196/1‑149 (MQ=255) gcgcgcCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTggcgcgcctaaaattggtgacaccgccgcgtggaaagaacgcgccgaccaccagggcggtctggatggcatcctggccaagg > 2:185074‑M2/1‑43 (MQ=255) gcgcgcCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTggcgcgcctaaaattggtgacaccgccgcgtggaaagaacgcgccgaccaccagggcggtctggatggcatcctggccaagg < 1:185074‑M2/125‑83 (MQ=255) gcgcgcCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTggcgcgcctaaaattggtgacaccgccgcgtggaaagaacgcgccgaccaccagggcggtctggatgccatcctggccaaggccattactggtatcaacgccatgc < 2:225695‑M2/149‑107 (MQ=255) gcgcgcCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTcc > 3:343653/1‑149 (MQ=255) gcgcCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTggcgcgcctaaaattggtgacaccgccgcgtggaaagaacgcgccgaccaccagggcggtctggatggcatcctggccaaggccattactggtatcaacgccatgccg < 3:152391‑M2/149‑109 (MQ=255) gcgcCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGTCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAg < 6:198258/149‑1 (MQ=255) gaaaGCCGCTGACATTGGATGCGTTGCAGTGCGTGGCGCTGATTTCATCAGGCGTTTTGGCTCCCCCGCCAACCGCTGCAGAGGACACTTCCATGACTTTGCACTACTTGCCCTGTACGCACACCTGGCCAACCGGCTCCAGGCGttt < 8:233958/146‑1 (MQ=255) gCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAGGCGTTTg < 8:75533/149‑1 (MQ=255) gCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAGGc > 4:5907/1‑140 (MQ=255) gCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAGGc < 3:5907/140‑1 (MQ=255) ccATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAGGCGTTTGGCAATgtcgtc < 8:22576/149‑1 (MQ=255) ccATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAGGCGTTTGGCAATgtcgt < 6:249548/148‑1 (MQ=255) gCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTc > 4:6781/1‑90 (MQ=255) gCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTc < 3:6781/90‑1 (MQ=255) gCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAGGCGTTTGGCAATGTCGTCATTGGTCg > 2:159082/1‑148 (MQ=255) cTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAGGCGTTTGGCAATGTCGTCATTGGTCGCAGCGGTTgcgc > 1:168676/1‑149 (MQ=255) | TGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAGGCGTTTGGCAATGTCGTCATTGGTCGCAGCGGTTGCGC > NC_002947/6016980‑6017272 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |