New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1343386	40 (0.710)	3 (0.060)	3/246	NT	7.1%	coding (166/1281 nt)	PP_1167	TRAP dicarboxylate transporter subunit DctM
	?	NC_002947	= 1343408	41 (0.760)					coding (144/1281 nt)	PP_1167	TRAP dicarboxylate transporter subunit DctM

GCACCGAAGAAGGTCGAGGCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTGCCGACAGGCCCAGGGCGTAGGCTACCGGCATGCCGATCAGAATCAGCACGATGAAACTGCCCAAC  >  NC_002947/1343238‑1343534                                                                                                                                                     |                                                                                                                                                     gCACCGAAGAAGGTCGAGGCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCGAGCACGAAGAATGGAATGGCCAG                                                                                                                                                      <  1:197632‑M1/149‑1 (MQ=255)  cACCGAAGAAGGTCGAGGCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAG                                                                                                                                                      >  1:323799‑M1/1‑148 (MQ=255)   aCCGAAGAAGGTCGAGGCTATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCTGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCTGCCTTGATCGCGCCGGCCAGCACGAAGAATGGAATGGCcagca                                                                                                                                                    <  7:291945/149‑1 (MQ=255)   aCCGAAGAAGGTCGAGGCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAG                                                                                                                                                      >  1:146985‑M1/1‑147 (MQ=255)      gaagaaGGTCGAGGCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGGCAGCAggg                                                                                                                                                 <  8:40385/149‑1 (MQ=255)             gTCGAGGCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACtt                                                                                                                                          >  8:66801/1‑149 (MQ=255)                gAGGCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGt                                                                                                                                        <  2:346304/148‑1 (MQ=255)                 aGGCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTa                                                                                                                                      <  2:318844/149‑1 (MQ=255)                  ggCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTaa                                                                                                                                     <  4:201805/149‑1 (MQ=255)                   gCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAac                                                                                                                                    <  3:317366/149‑1 (MQ=255)                     cATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAacac                                                                                                                                  <  3:328101/149‑1 (MQ=255)                     cATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCCACATGCCGCCTTCGGCCAAGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCACCAGGGAGAACTTCTTAacac                                                                                                                                  >  2:302169/1‑149 (MQ=255)                      atgatgTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAacac                                                                                                                                  >  2:199171/1‑148 (MQ=255)                        gATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCAc                                                                                                                               <  4:3729‑M2/149‑2 (MQ=255)                         aTGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCAct                                                                                                                              >  3:3729‑M2/1‑147 (MQ=255)                         aTGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGAGCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCAct                                                                                                                              >  6:217463‑M2/1‑147 (MQ=255)                          tGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCActg                                                                                                                             <  4:145732‑M2/149‑4 (MQ=255)                           gTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCActgg                                                                                                                            <  8:216771‑M2/149‑5 (MQ=255)                                 cAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGtggtgttaacaagttctccctgctggccattc                                                                                                                      <  4:183528‑M1/149‑33 (MQ=255)                                 cAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCt                                                                                                                      <  3:62161/149‑1 (MQ=255)                                 cAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCt                                                                                                                      <  7:216771/149‑1 (MQ=255)                                     gACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGtggtgttaacaagttctccctgctggccattccat                                                                                                                   <  8:116384‑M1/148‑36 (MQ=255)                                     gACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGtggtgttaacaagttctccctgctggccattccat                                                                                                                   >  7:116384‑M1/1‑113 (MQ=255)                                           ccGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGatcatcat                                                                                                            >  4:318751/1‑149 (MQ=255)                                            cGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGatcatcatc                                                                                                           <  2:146985/149‑1 (MQ=255)                                              ccACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGc                                                                                                         <  3:318751/149‑1 (MQ=255)                                              ccACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGc                                                                                                         <  2:108006/149‑1 (MQ=255)                                                        aGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCggg                                                                                               <  3:145732/149‑1 (MQ=255)                                                           ccaccaGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCgg                                                                                                <  4:142514/145‑1 (MQ=255)                                                           ccaccaGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCgg                                                                                                >  3:142514/1‑145 (MQ=255)                                                              ccaGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCAct                                                                                                                              <  3:53212‑M2/112‑3 (MQ=255)                                                              ccaGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCAct                                                                                                                              >  4:53212‑M2/1‑110 (MQ=255)                                                                  cACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATc                                                                                      >  2:223064/1‑148 (MQ=255)                                                                     cccGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCAc                                                                                                                               <  6:188650‑M2/104‑2 (MQ=255)                                                                     cccGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCAc                                                                                                                               >  5:188650‑M2/1‑103 (MQ=255)                                                                     cccGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATccac                                                                                   >  6:43475/1‑148 (MQ=255)                                                                     cccGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATccac                                                                                   >  4:135700/1‑148 (MQ=255)                                                                     cccGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATAATCGCCTGCAGCGGGATGTCGATccac                                                                                   >  8:71057/1‑148 (MQ=255)                                                                       cGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAg                                                                                >  1:341599/1‑149 (MQ=255)                                                                         gCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCgg                                                                                                >  1:139400/1‑131 (MQ=255)                                                                         gCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCgg                                                                                                <  2:139400/131‑1 (MQ=255)                                                                         gCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGgc                                                                              <  2:84800/149‑1 (MQ=255)                                                                           aaaGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGgcgc                                                                            <  1:199171/149‑1 (MQ=255)                                                                                 caccaGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGAt                                                                        >  8:18142/1‑147 (MQ=255)                                                                                   ccaGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGt                                                                    >  4:130946/1‑149 (MQ=255)                                                                                    caGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTg                                                                   <  1:223064/149‑1 (MQ=255)                                                                                        cgccgcGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTGCCGa                                                               <  7:18142/149‑1 (MQ=255)                                                                                          ccgcGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTGCCGACa                                                             <  5:106172/149‑1 (MQ=255)                                                                                                 aTGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTGCCGACAGGCCCAg                                                      <  2:323799/149‑1 (MQ=255)                                                                                                   gccgccTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTGCCGACAGGCCCAggg                                                    >  7:236878/1‑149 (MQ=255)                                                                                                     cgccTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATc                                                                                      <  4:157546/113‑1 (MQ=255)                                                                                                     cgccTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATc                                                                                      >  3:157546/1‑113 (MQ=255)                                                                                                        aaggcggcATGATCGCGCCGGCGAGCACGAAGAATGGAATGGCGAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATACACCAGGCGCCGATCAGTGCCGACAGGCCCAGTGGGTAg                                               <  1:324583/142‑1 (MQ=255)                                                                                                                        gcCGGCCAGCACGAAGAATGGAATGGCCATCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTGCCGACAGGCCCAGGGCGTAGGCTACCGGCATGCCGa                               <  7:66801/149‑1 (MQ=255)                                                                                                                           ggCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTGCCGACAGGCCCAGGGCGTAGGCTACCGGCATGCCGATCa                            <  8:236878/149‑1 (MQ=255)                                                                                                                           ggCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTGCCGACAGGCCCAGGGCGTAGGCTACCGGCATGCCGATCa                            <  2:341599/149‑1 (MQ=255)                                                                                                                                       gaatggaatgGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTGCCGACAGGCCCAGGGCGTAGGCTACCGGCATGCCGATCAGAATCAGCACGa                >  7:179454/1‑149 (MQ=255)                                                                                                                                         atggaatggCCAGCAGGGAGAACTTGTTAACACCActggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggggtgctggtgggcttcgtgcgtggcgggctgtc               <  8:116384‑M2/148‑114 (MQ=255)                                                                                                                                         atggaatggCCAGCAGGGAGAACTTGTTAACACCActggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggggtgctggtgggcttcgtgcgtggcgggctgtc               >  7:116384‑M2/1‑35 (MQ=255)                                                                                                                                            gaatggCCAGCAGGGAGAACTTGTTAACACCActggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggggtgctggtgggcttcgtgcgtggcgggctgtcgctg           <  4:183528‑M2/149‑118 (MQ=255)                                                                                                                                                  ccAGtggtgttaacaagttctccctgctggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggggtgctggtgggcttcgtgcgtggcgggctgtcgctggtcaac     <  8:216771‑M1/149‑146 (MQ=255)                                                                                                                                                   cAGtggtgttaacaagttctccctgctggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggggtgctggtgggcttcgtgcgtggcgggctgtcgctggtcaaca    <  4:145732‑M1/149‑147 (MQ=255)                                                                                                                                                    aGtggtgttaacaagttctccctgctggccattccattcttcgtgctggccggcgcgctcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggggtgctggtgggcttcgtgcgtggcgggctgtcgctggtcaacat   >  6:217463‑M1/1‑2 (MQ=255)                                                                                                                                                    aGtggtgttaacaagttctccctgctggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggggtgctggtgggcttcgtgcgtggcgggctgtcgctggtcaacat   >  3:3729‑M1/1‑2 (MQ=255)                                                                                                                                                    aGtggtgttaacaagttctccctgctggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggggtgctgg                                        <  3:53212‑M1/112‑111 (MQ=255)                                                                                                                                                    aGtggtgttaacaagttctccctgctggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggggtgctgg                                        >  4:53212‑M1/1‑2 (MQ=255)                                                                                                                                                     gtggtgttaacaagttctccctgctggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggggtgctggtgggcttcgtgcgtggcgggctgtcgctggtcaacatc  <  4:3729‑M1/149‑149 (MQ=255)                                                                                                                                                     gtggtgttaacaagttctccctgctggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggg                                               <  6:188650‑M1/104‑104 (MQ=255)                                                                                                                                                     gtggtgttaacaagttctccctgctggccattccattcttcgtgctggccggcgcgatcatggccgaaggcggcatgtcgcggcggctggtggcctttgccggg                                               >  5:188650‑M1/1‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GCACCGAAGAAGGTCGAGGCCATGATGTTGACCAGCGACAGCCCGCCACGCACGAAGCCCACCAGCACCCCGGCAAAGGCCACCAGCCGCCGCGACATGCCGCCTTCGGCCATGATCGCGCCGGCCAGCACGAAGAATGGAATGGCCAGCAGGGAGAACTTGTTAACACCACTGGCCACCTGGATCATCATCGCCTGCAGCGGGATGTCGATCCACCAGGCGCCGATCAGTGCCGACAGGCCCAGGGCGTAGGCTACCGGCATGCCGATCAGAATCAGCACGATGAAACTGCCCAAC  >  NC_002947/1343238‑1343534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.