New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2024359	39 (0.690)	3 (0.060)	3/246	NT	7.1%	coding (498/1143 nt)	wbpY	glycosyl transferase WbpY
	?	NC_002947	= 2024384	42 (0.780)					coding (523/1143 nt)	wbpY	glycosyl transferase WbpY

TCGCCCTTTACCTGGGCTCATTGCCACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGCCGCGCAAA  >  NC_002947/2024213‑2024503                                                                                                                                                   |                                                                                                                                                 tCGCCCTTTACCTGGGCTCATTGCCACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACt                                                                                                                                                >  5:1609/1‑149 (MQ=255)    cccTTTACCTGGGCTCATTGCCACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTg                                                                                                                                               >  5:224351/1‑147 (MQ=255)    cccTTTACCTGGGCTCATTGCCACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGa                                                                                                                                             <  7:71556/149‑1 (MQ=255)     ccTTTACCTGGGCTCATTGCCACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAg                                                                                                                                            >  8:134429/1‑149 (MQ=255)             tGGGCTCATTGCCACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGAGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCa                                                                                                                                    >  1:124612/1‑149 (MQ=255)                 cTCATTGCCACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCg                                                                                                                                >  2:203371/1‑149 (MQ=255)                        ccACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGc                                                                                                                         <  3:283333/149‑1 (MQ=255)                               ccgcAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCAgcggtaccgcatgaatgcgctccagtggccag                                                                                                                  >  5:282420‑M1/1‑117 (MQ=255)                               ccgcAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCtggccag                                                                                                                  <  7:333252‑M2/149‑8 (MQ=255)                               ccgcAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCAACACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCAgcggtaccgcatgaatgcgctccagtggccag                                                                                                                  <  1:65286‑M1/149‑33 (MQ=255)                                cgcAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCAgcggtaccgcatgaatgcgctccagtggccagc                                                                                                                 <  6:282420‑M1/149‑34 (MQ=255)                                    gATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCt                                                                                                                        >  7:257230‑M2/1‑137 (MQ=255)                                    gATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTcgc                                                                                                             >  4:323452/1‑149 (MQ=255)                                    gATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCATGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCt                                                                                                                        <  8:257230‑M2/138‑2 (MQ=255)                                         cccGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAg                                                                                                        >  6:303032/1‑149 (MQ=255)                                                ccTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATc                                                                                                 <  3:323452/149‑1 (MQ=255)                                                 cTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATc                                                                                                 >  8:243392/1‑148 (MQ=255)                                                    cAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTc                                                                                              <  6:224351/148‑1 (MQ=255)                                                    cAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGCTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTc                                                                                              <  7:134429/148‑1 (MQ=255)                                                     aaaaGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCg                                                                                             <  7:243392/148‑1 (MQ=255)                                                       aaGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGAc                                                                                          >  5:158411/1‑149 (MQ=255)                                                         ggAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGActc                                                                                        >  3:37556/1‑149 (MQ=255)                                                              tCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAg                                                                                   >  6:73368/1‑149 (MQ=255)                                                                       cccTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGt                                                                          <  6:1609/149‑1 (MQ=255)                                                                                 tGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGCACTCCTCAGGCATTGCGTGAAACCCTTg                                                                <  1:203371/149‑1 (MQ=255)                                                                                          tctcATCACGGTTTAGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTCGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCATTacacagaaag                                                       >  8:282250/1‑143 (MQ=255)                                                                                          tctGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTgcacggcacg                                                       >  5:168200/1‑149 (MQ=255)                                                                                          tctGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTgcacggcacg                                                       >  1:321380/1‑149 (MQ=255)                                                                                              aTCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGcacggcacgg                                                      <  5:221533/146‑1 (MQ=255)                                                                                              aTCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCt                                                   <  4:37556/149‑1 (MQ=255)                                                                                                cACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTg                                                  >  1:300495/1‑148 (MQ=255)                                                                                                cACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTg                                                  >  1:46897/1‑148 (MQ=255)                                                                                                cACGGTCTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGActcctc                                                                                     <  5:105323/113‑1 (MQ=255)                                                                                                cACGGTCTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGCCCAGTTCGCCGCAGTTCCATCCTCGGActcctc                                                                                     >  6:105323/1‑113 (MQ=255)                                                                                                 aCGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGa                                                <  2:321380/149‑1 (MQ=255)                                                                                                 aCGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGa                                                <  5:303032/149‑1 (MQ=255)                                                                                                  cGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAg                                               >  2:218275/1‑149 (MQ=255)                                                                                                     tttCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTa                                            <  2:46897/149‑1 (MQ=255)                                                                                                           accacACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCTTTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAggcggc                                      <  2:124612/149‑1 (MQ=255)                                                                                                             cacaCTCGGAAGGAGTTGGCGGATTAATTTGGCTGGCAACTGGAGCGCATTCATGCGGTACCGCTGGCAAGTTCGCCGCAGTTCCATCCTCGTAATCCTAAGGCATTGCTTGAAACCCTTg                                                                >  6:364167/1‑121 (MQ=255)                                                                                                             cacaCGCGGAAGGAGTTTGCGGATTCCTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTg                                                                <  5:364167/121‑1 (MQ=255)                                                                                                             cacaCGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTa                                    <  5:73368/149‑1 (MQ=255)                                                                                                                acGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAg                                 >  7:243701/1‑149 (MQ=255)                                                                                                                  gcgGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGcc                               >  3:55898/1‑149 (MQ=255)                                                                                                                     gAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGt                            <  8:333252/149‑1 (MQ=255)                                                                                                                      aaGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGtt                           <  6:168200/149‑1 (MQ=255)                                                                                                                          aGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTtcgtc                       <  7:32592/149‑1 (MQ=255)                                                                                                                                        tttGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGCCTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGcc         >  5:364916/1‑149 (MQ=255)                                                                                                                                            gctggcCACTGGAGCGCATTCATGCGGTACCGCtggccagccaaagtaatccgccaactccttccgcgtgtggtgcgaaaccgtgatcagagcgtcagcacgctccagggtcagcttgagctccttttgaaggtaacgggcaatctgcg     <  6:282420‑M2/149‑117 (MQ=255)                                                                                                                                             ctggcCAgcggtaccgcatgaatgcgctccagtggccagccaaagtaatccgccaactccttccgcgtgtggtgcgaaaccgtgatcagagcgtcagcacgctccagggtcagcttgagctccttttgaaggtaacgggcaatctgcgg    <  7:333252‑M1/149‑143 (MQ=255)                                                                                                                                             ctggcCACTGGAGCGCATTCATGCGGTACCGCtggccagccaaagtaatccgccaactccttccgcgtgtgttgcgaaaccgtgatcagagcgtcagcacgctccagggtcagcttgagctccttttgaaggtaacgggcaatctgcgg    <  1:65286‑M2/149‑118 (MQ=255)                                                                                                                                             ctggcCACTGGAGCGCATTCATGCGGTACCGCtggccagccaaagtaatccgccaactccttccgcgtgtggtgcgaaaccgtgatcagagcgtcagcacgctccagggtcagcttgagctccttttgaaggtaacgggcaatctgcgg    >  5:282420‑M2/1‑32 (MQ=255)                                                                                                                                                gcCACTGGAGCACATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGCCGCGCaaa  >  8:190585/1‑148 (MQ=255)                                                                                                                                                   agcggtaccgcatgaatgcgctccagtggccagccaaagtaatccgccaactccttccgcgtgtggtgcgaaaccgtgatcagagcgtcagcacgctccatggtcagcttgagctccttttgaaggtaacgggcaatc         <  8:257230‑M1/138‑138 (MQ=255)                                                                                                                                                   agcggtaccgcatgaatgcgctccagtggccagccaaagtaatccgccaactccttccgcgtgtggtgcgaaaccgtgatcagagcgtcagcacgctccagggtcagcttgagctccttttgaaggtaacgggcaatc         >  7:257230‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 TCGCCCTTTACCTGGGCTCATTGCCACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGCCGCGCAAA  >  NC_002947/2024213‑2024503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.