New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2024359	39 (0.690)	3 (0.060)	3/246	NT	7.1%	coding (498/1143 nt)	wbpY	glycosyl transferase WbpY
	?	NC_002947	= 2024384	42 (0.780)					coding (523/1143 nt)	wbpY	glycosyl transferase WbpY

CCACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGCCGCGCAAAAACATCGA  >  NC_002947/2024236‑2024511                                                                                                                                                     |                                                                                                                                ccACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGc                                                                                                                                 <  3:283333/149‑1 (MQ=255)        ccgcAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCtggccag                                                                                                                          <  7:333252‑M2/149‑8 (MQ=255)             gATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCt                                                                                                                                >  7:257230‑M2/1‑137 (MQ=255)             gATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTcgc                                                                                                                     >  4:323452/1‑149 (MQ=255)             gATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCATGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCt                                                                                                                                <  8:257230‑M2/138‑2 (MQ=255)                  cccGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAg                                                                                                                >  6:303032/1‑149 (MQ=255)                         ccTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATc                                                                                                         <  3:323452/149‑1 (MQ=255)                          cTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATc                                                                                                         >  8:243392/1‑148 (MQ=255)                             cAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTc                                                                                                      <  6:224351/148‑1 (MQ=255)                             cAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGCTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTc                                                                                                      <  7:134429/148‑1 (MQ=255)                              aaaaGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCg                                                                                                     <  7:243392/148‑1 (MQ=255)                                aaGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGAc                                                                                                  >  5:158411/1‑149 (MQ=255)                                  ggAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGActc                                                                                                >  3:37556/1‑149 (MQ=255)                                       tCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAg                                                                                           >  6:73368/1‑149 (MQ=255)                                                cccTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGt                                                                                  <  6:1609/149‑1 (MQ=255)                                                          tGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGCACTCCTCAGGCATTGCGTGAAACCCTTg                                                                        <  1:203371/149‑1 (MQ=255)                                                                   tctcATCACGGTTTAGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTCGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCATTacacagaaag                                                               >  8:282250/1‑143 (MQ=255)                                                                   tctGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTgcacggcacg                                                               >  1:321380/1‑149 (MQ=255)                                                                   tctGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTgcacggcacg                                                               >  5:168200/1‑149 (MQ=255)                                                                       aTCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGcacggcacgg                                                              <  5:221533/146‑1 (MQ=255)                                                                       aTCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCt                                                           <  4:37556/149‑1 (MQ=255)                                                                         cACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTg                                                          >  1:300495/1‑148 (MQ=255)                                                                         cACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTg                                                          >  1:46897/1‑148 (MQ=255)                                                                         cACGGTCTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGActcctc                                                                                             <  5:105323/113‑1 (MQ=255)                                                                         cACGGTCTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGCCCAGTTCGCCGCAGTTCCATCCTCGGActcctc                                                                                             >  6:105323/1‑113 (MQ=255)                                                                          aCGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGa                                                        <  5:303032/149‑1 (MQ=255)                                                                          aCGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGa                                                        <  2:321380/149‑1 (MQ=255)                                                                           cGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAg                                                       >  2:218275/1‑149 (MQ=255)                                                                              tttCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTa                                                    <  2:46897/149‑1 (MQ=255)                                                                                    accacACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCTTTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAggcggc                                              <  2:124612/149‑1 (MQ=255)                                                                                      cacaCTCGGAAGGAGTTGGCGGATTAATTTGGCTGGCAACTGGAGCGCATTCATGCGGTACCGCTGGCAAGTTCGCCGCAGTTCCATCCTCGTAATCCTAAGGCATTGCTTGAAACCCTTg                                                                        >  6:364167/1‑121 (MQ=255)                                                                                      cacaCGCGGAAGGAGTTTGCGGATTCCTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTg                                                                        <  5:364167/121‑1 (MQ=255)                                                                                      cacaCGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTa                                            <  5:73368/149‑1 (MQ=255)                                                                                         acGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAg                                         >  7:243701/1‑149 (MQ=255)                                                                                           gcgGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGcc                                       >  3:55898/1‑149 (MQ=255)                                                                                              gAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGt                                    <  8:333252/149‑1 (MQ=255)                                                                                               aaGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGtt                                   <  6:168200/149‑1 (MQ=255)                                                                                                   aGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTtcgtc                               <  7:32592/149‑1 (MQ=255)                                                                                                                 tttGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGCCTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGcc                 >  5:364916/1‑149 (MQ=255)                                                                                                                     gctggcCACTGGAGCGCATTCATGCGGTACCGCtggccagccaaagtaatccgccaactccttccgcgtgtggtgcgaaaccgtgatcagagcgtcagcacgctccagggtcagcttgagctccttttgaaggtaacgggcaatctgcg             <  6:282420‑M2/149‑117 (MQ=255)                                                                                                                      ctggcCACTGGAGCGCATTCATGCGGTACCGCtggccagccaaagtaatccgccaactccttccgcgtgtgttgcgaaaccgtgatcagagcgtcagcacgctccagggtcagcttgagctccttttgaaggtaacgggcaatctgcgg            <  1:65286‑M2/149‑118 (MQ=255)                                                                                                                      ctggcCACTGGAGCGCATTCATGCGGTACCGCtggccagccaaagtaatccgccaactccttccgcgtgtggtgcgaaaccgtgatcagagcgtcagcacgctccagggtcagcttgagctccttttgaaggtaacgggcaatctgcgg            >  5:282420‑M2/1‑32 (MQ=255)                                                                                                                         gcCACTGGAGCACATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGCCGCGCaaa          >  8:190585/1‑148 (MQ=255)                                                                                                                             cTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGTCACCCTTGCTCGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGCCGCGcaacaaacg     >  8:159693/1‑146 (MQ=255)                                                                                                                                gAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCCTCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGCGCCGCGCAAAAACCTCgc  >  8:131854/1‑148 (MQ=255)                                                                                                                                gAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGCCGCGCAAAAACATc    <  7:282250/147‑1 (MQ=255)                                                                                                                                gAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGCCGCGCAAAAACATc    >  2:58882/1‑147 (MQ=255)                                                                                                                                gAGCACATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGCCGCGCAAAAACATc    <  7:190585/147‑1 (MQ=255)                                                                                                                                           tGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAggcgg                                               >  7:269567/1‑93 (MQ=255)                                                                                                                                           tGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAggcgg                                               <  8:269567/93‑1 (MQ=255)                                                                                                                                                 aCCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTtcgt                                >  4:56307/1‑102 (MQ=255)                                                                                                                                                     |                                                                                                                                CCACACGCCGCAGATTGCCCGTTACCTTCAAAAGGAGCTCAAGCTGACCCTGGAGCGTGCTGACGCTCTGATCACGGTTTCGCACCACACGCGGAAGGAGTTGGCGGATTACTTTGGCTGGCCACTGGAGCGCATTCATGCGGTACCGCTGGCCAGTTCGCCGCAGTTCCATCCTCGGACTCCTCAGGCATTGCGTGAAACCCTTGCACGGCACGGCCTGGAGCTAGGCGGCTACAGCCTGTTCGTCGGTACCATCGAGCCGCGCAAAAACATCGA  >  NC_002947/2024236‑2024511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.