New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2656526 =	34 (0.600)	3 (0.060)	3/250	NT	9.4%	coding (1086/1341 nt)	pabB	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex
	?	NC_002947	2656578 =	25 (0.460)					coding (1034/1341 nt)	pabB	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex

GACCTGGCCATCTTTGATCAGCAAGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGC  >  NC_002947/2656379‑2656674                                                                                                                                                     |                                                                                                                                                     tgatgatcgtcgacctgctgcgcaacgacctggggcgcacgtgcgagattggctcagtgaaggtaccggaactgttcagcctggagagttaccccaacgtgcaccatctggtcagcagcatcaccggccagctggccagcgacaaggat                                                                                                                                                      <  3:291403‑M1/1‑1 (MQ=255)  gatgatcgtcgacctgctgcgcaacgacctggggcgcacgtgcgagattggctcagtgaaggtaccggaactgttcagcctggagagttaccccaacgtgcaccatctggtcagcagcatcaccggccagctggccagcgacaaggaTg                                                                                                                                                     <  3:164568‑M1/2‑1 (MQ=255)       gCCATCTTTGATCAGCAAGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGcc                                                                                                                                                 <  1:352476/147‑1 (MQ=255)         cATCTTTGATCAGCAAGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGt                                                                                                                                              >  2:165275/1‑148 (MQ=255)         cATCTTTGATCAGCAAGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGt                                                                                                                                              >  2:95511/1‑148 (MQ=255)               tGATCAGCAAGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATc                                                                                                                                          <  4:351552/146‑1 (MQ=255)               tGATCAGCAAGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGa                                                                                                                                        <  1:95511/148‑1 (MQ=255)                  tCAGCAAGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATC‑‑CATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGa                                                                                                                                            <  8:167613/139‑1 (MQ=255)                  tCAGCAAGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATC‑‑CATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGa                                                                                                                                            >  7:167613/1‑139 (MQ=255)                     gCAAGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAgccgc                                                                                                                                   >  8:8459/1‑147 (MQ=255)                        aGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAggg                                                                                                                              <  3:270200/149‑1 (MQ=255)                                aTGGCGATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGTCGGTGATCGAGCCGCCAGGGAAGCTGTc                                                                                                                      <  4:82551/149‑1 (MQ=255)                                     gcacgtgcgagattggctcagtgaaggtaccggaactgttcagcctggagagttaccccaacgtgcaccatctggtcagcagcatcaccggccagctggccagcgacaaggaTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGcc                                                                                                                   <  1:208855‑M1/36‑1 (MQ=255)                                     gATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGCGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGa                                                                                                                 >  8:42813/1‑149 (MQ=255)                                               tCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTATAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAg                                                                                                       >  1:242905/1‑149 (MQ=255)                                                 cATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGACGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAgcg                                                                                                     >  3:360021/1‑149 (MQ=255)                                                  aTTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAgcg                                                                                                     >  7:109579/1‑148 (MQ=255)                                                   tttCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAgcga                                                                                                    >  1:81407/1‑147 (MQ=255)                                                    gctcagtgaaggtaccggaactgttcagcctggagagttaccccaacgtgcaccatctggtcagcagcatcaccggccagctggccagcgacaaggaTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAgcgc                                                                                                    >  2:208855‑M1/98‑148 (MQ=255)                                                        agtgaaggtaccggaactgttcagcctggagagttaccccaacgtgcaccatctggtcagcagcatcaccggccagctggccagcgacaaggaTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATcc                                                                                                >  4:291403‑M1/94‑148 (MQ=255)                                                                aTCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAg                                                                                                                           >  7:339669/1‑112 (MQ=255)                                                                aTCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAg                                                                                                                           <  8:339669/112‑1 (MQ=255)                                                                    acaTACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAg                                                                                  >  8:114100/1‑149 (MQ=255)                                                                      aTACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCt                                                                                <  6:221544/149‑1 (MQ=255)                                                                          agcagcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGcc                                                                            >  4:92166/1‑149 (MQ=255)                                                                           ttcagcctggagagttaccccaacgtgcaccatctggtcagcagcatcaccggccagctggccagcgacaaggaTgcgc                                                                                                                                                  <  5:271867‑M1/5‑1 (MQ=255)                                                                           ttcagcctggagagttaccccaacgtgcaccatctggtcagcagcatcaccggccagctggccagcgacaaggaTgcgc                                                                                                                                                  >  6:271867‑M1/75‑79 (MQ=255)                                                                           gcagcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCCGGCCAGCTGGCCg                                                                           <  7:8459/149‑1 (MQ=255)                                                                             agcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGc                                                                             <  5:212303/145‑1 (MQ=255)                                                                             agcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGc                                                                             >  6:212303/1‑145 (MQ=255)                                                                              gcGAGCCGCAGTATAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTg                                                                        <  2:242905/149‑1 (MQ=255)                                                                              gcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTg                                                                        <  3:92166/149‑1 (MQ=255)                                                                              gcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTACGGGTGCGCCGGTGATCGCCCCGCCAGGGAAGGGGTCGCCGAAAAGTGCCCGCGCATCCTTGGCGCTGGCCAGCTGGCCGGt                                                                         >  1:108054/1‑149 (MQ=255)                                                                                    cGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGAtgctg                                                                  >  3:205938/1‑149 (MQ=255)                                                                                           cAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCa                                                           <  7:114100/149‑1 (MQ=255)                                                                                                           ggCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGTCCAGATGGTGCACGTTggg                                           <  7:42813/149‑1 (MQ=255)                                                                                                              tCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGt                                         >  8:119831/1‑148 (MQ=255)                                                                                                                                  cATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGtt                    >  8:178175/1‑149 (MQ=255)                                                                                                                                  cATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGtt                    >  3:333281/1‑149 (MQ=255)                                                                                                                                       cgcgGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCgg                >  2:298129/1‑148 (MQ=255)                                                                                                                                          ggATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTAcc            >  5:220173/1‑149 (MQ=255)                                                                                                                                                 c‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCtt          <  4:205938/144‑1 (MQ=255)                                                                                                                                                   ggTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACt      >  8:189288/1‑147 (MQ=255)                                                                                                                                                     TGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGc  >  7:189288‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GACCTGGCCATCTTTGATCAGCAAGCTGCGAATGGCGATCGAACTGTCCATTTCGCCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGC  >  NC_002947/2656379‑2656674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.