New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2656526 =	34 (0.600)	3 (0.060)	3/250	NT	9.4%	coding (1086/1341 nt)	pabB	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex
	?	NC_002947	2656578 =	25 (0.460)					coding (1034/1341 nt)	pabB	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex

CCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGTTGCGCAGCAGGTCGACGATCATCA  >  NC_002947/2656434‑2656725                                                                                                                                                  |                                                                                                                                                    agtgaaggtaccggaactgttcagcctggagagttaccccaacgtgcaccatctggtcagcagcatcaccggccagctggccagcgacaaggaTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATcc                                                                                                                                                   >  4:291403‑M1/94‑148 (MQ=255)             acaTACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAg                                                                                                                                     >  8:114100/1‑149 (MQ=255)               aTACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCt                                                                                                                                   <  6:221544/149‑1 (MQ=255)                   agcagcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGcc                                                                                                                               >  4:92166/1‑149 (MQ=255)                    gcagcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCCGGCCAGCTGGCCg                                                                                                                              <  7:8459/149‑1 (MQ=255)                      agcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGc                                                                                                                                <  5:212303/145‑1 (MQ=255)                      agcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGc                                                                                                                                >  6:212303/1‑145 (MQ=255)                       gcGAGCCGCAGTATAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTg                                                                                                                           <  2:242905/149‑1 (MQ=255)                       gcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTg                                                                                                                           <  3:92166/149‑1 (MQ=255)                       gcGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTACGGGTGCGCCGGTGATCGCCCCGCCAGGGAAGGGGTCGCCGAAAAGTGCCCGCGCATCCTTGGCGCTGGCCAGCTGGCCGGt                                                                                                                            >  1:108054/1‑149 (MQ=255)                             cGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGAtgctg                                                                                                                     >  3:205938/1‑149 (MQ=255)                                    cAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCa                                                                                                              <  7:114100/149‑1 (MQ=255)                                                    ggCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGTCCAGATGGTGCACGTTggg                                                                                              <  7:42813/149‑1 (MQ=255)                                                       tCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGt                                                                                            >  8:119831/1‑148 (MQ=255)                                                                           cATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGtt                                                                       >  3:333281/1‑149 (MQ=255)                                                                           cATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGtt                                                                       >  8:178175/1‑149 (MQ=255)                                                                                cgcgGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCgg                                                                   >  2:298129/1‑148 (MQ=255)                                                                                   ggATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTAcc                                                               >  5:220173/1‑149 (MQ=255)                                                                                          c‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCtt                                                             <  4:205938/144‑1 (MQ=255)                                                                                           ggatgcgctggacctgatcggcgacagcttccctggcggctcgatcaccggcgcaTCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACt                                                         >  4:291403‑M2/56‑148 (MQ=255)                                                                                            ggTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACt                                                         >  8:189288/1‑147 (MQ=255)                                                                                              TGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGc                                                     >  7:189288‑M1/1‑149 (MQ=255)                                                                                               gcgctggacctgatcggcgacagcttccctggcggctcgatcaccggcgcaTCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGc                                                     >  2:208855‑M2/52‑148 (MQ=255)                                                                                               GCGCCGGTGATGGATCCGCCAGGGAAGCTGTCTCCGATCAGGTACAGCGCATCCTTGTCGGTGGCCAGCTGGCCTGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTTAACAGTTCCGGTACCTTCACTGAGc                                                     >  4:360021‑M1/1‑148 (MQ=255)                                                                                                   cGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAAtc                                                >  2:91529/1‑149 (MQ=255)                                                                                                              ggcgacagcttccctggcggctcgatcaccggcgcaTCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTgc                                      <  1:208855‑M2/112‑1 (MQ=255)                                                                                                                     ggAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAgg                              >  4:164568/1‑149 (MQ=255)                                                                                                                          cTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGtt                         <  6:220173/149‑1 (MQ=255)                                                                                                                                ccGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGTTg                        >  4:208858/1‑144 (MQ=255)                                                                                                                                ccGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGTTg                        <  3:208858/144‑1 (MQ=255)                                                                                                                                 cGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGTTGCgcagc                  <  4:333281/149‑1 (MQ=255)                                                                                                                                        gTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGtt                                                                       >  7:171350/1‑89 (MQ=255)                                                                                                                                        gTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGtt                                                                       <  8:171350/89‑1 (MQ=255)                                                                                                                                        gTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGtt                         <  7:128027/135‑1 (MQ=255)                                                                                                                                        gTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGtt                         >  8:128027/1‑135 (MQ=255)                                                                                                                                         tCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGTTGCGCAGCAGGTcgac          >  6:46491/1‑149 (MQ=255)                                                                                                                                             gcgcaTCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGaa                                                                            >  6:271867‑M2/6‑79 (MQ=255)                                                                                                                                             gcgcaTCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGaa                                                                            <  5:271867‑M2/74‑1 (MQ=255)                                                                                                                                                caTCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGTTGCGCAGCAGGTCGACGatcatc   <  3:164568‑M2/147‑1 (MQ=255)                                                                                                                                                 aTCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGTTGCGCAGCAGGTCGACGAtcatca  <  3:291403‑M2/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CCGCGCACATCCACATACAGCAGCGAGCCGCAGTACAGCGCGCGGCGCGCGGGCTCCAGTTCGTCGATGATCTGCATGGCGCGGATCTTC‑GGTGCGCCGGTGATCGAGCCGCCAGGGAAGCTGTCGCCGATCAGGTCCAGCGCATCCTTGTCGCTGGCCAGCTGGCCGGTGATGCTGCTGACCAGATGGTGCACGTTGGGGTAACTCTCCAGGCTGAACAGTTCCGGTACCTTCACTGAGCCAATCTCGCACGTGCGCCCCAGGTCGTTGCGCAGCAGGTCGACGATCATCA  >  NC_002947/2656434‑2656725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.