| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4505682 | 45 (0.790) | 4 (0.070) | 4/252 | NT | 8.5% | coding (456/1002 nt) | PP_3997 | glycosyl transferase |
| ? | NC_002947 | = 4505705 | 43 (0.780) | coding (479/1002 nt) | PP_3997 | glycosyl transferase | |||||
GTCACCTGCCCTGGTACCTGCTGGCCGCCAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCG > NC_002947/4505534‑4505829 | gTCACCTGCCCTGGTACCTGCTGGCCGCCAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGG < 5:263064‑M1/149‑1 (MQ=255) aCCTGCCCTGGTACCTGCTGGCCGCCAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGgcc < 6:33887/149‑1 (MQ=255) cTGCCCTGGTACCTGCTGGCCGCCAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGgccgc > 7:52420/1‑149 (MQ=255) gCCCTGGTACCTGCTGGCCGCCAAGTGGCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGgccgcc > 1:188561/1‑149 (MQ=255) aCCTGCTGGCCGCCAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAAc > 6:175125/1‑149 (MQ=255) tgctgGCCGCCAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAAcgcg > 7:13002/1‑149 (MQ=255) gctgGCCGCCAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACgcgc > 6:178817/1‑149 (MQ=255) tgGCCGCCAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTg > 7:299113/1‑149 (MQ=255) cAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGaccagc > 4:144727/1‑149 (MQ=255) cAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGaccagc < 6:201598/149‑1 (MQ=255) tGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGtccagcgcgttgccgacggcggcccagtcgcgg > 5:305601‑M1/1‑113 (MQ=255) tGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGtccagcgcgttgccgacggcggcccagtcgcgg < 6:305601‑M1/146‑34 (MQ=255) aTGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCAttcttc < 1:202972/149‑1 (MQ=255) tGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTcc > 3:163874/1‑149 (MQ=255) tGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCAGTGCCGCGACTGGGCCGCCGACGGCAACGCGCTGGACCAGCACCAGCTGGCAttcttca > 5:263378/1‑148 (MQ=255) gCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTccc < 2:188561/148‑1 (MQ=255) aTTCTGATGCACGGCGGCGGCGCACACACTGCCGTGCGAATGTATACAGAGCAACTCCTAGACCTGCTGCAGATACCGCTGTGCAGCGACTGTGCCTCCGTCGGCACAGCGCTGGACCAGCACAAGATGGCATTCTTCCCTCTGCACGa > 7:320936/1‑149 (MQ=255) aTTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGa > 4:105616/1‑149 (MQ=255) tCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTcc < 7:328038/137‑1 (MQ=255) tCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAAATCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTcc > 8:328038/1‑137 (MQ=255) aTGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTgg < 5:175125/147‑1 (MQ=255) cACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGAccag > 6:175256‑M2/1‑107 (MQ=255) cACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGAccag < 5:175256‑M2/111‑5 (MQ=255) gcACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTg < 2:359595/93‑1 (MQ=255) gcACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTg > 1:359595/1‑93 (MQ=255) acacTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGtccagcgcgttgccgacggcggcccagt < 7:238972‑M1/96‑29 (MQ=255) acacTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGtccagcgcgttgccgacggcggcccagt > 8:238972‑M1/1‑68 (MQ=255) ccGGGCTTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGAc < 8:52420/149‑1 (MQ=255) ccGGGCGTATGTATACAGAGCAACTCCGCGACCTGCGGCAGAGTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGAc < 8:299113/149‑1 (MQ=255) ggCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGa < 3:226159/141‑1 (MQ=255) ggCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGa > 4:226159/1‑141 (MQ=255) gtatgtatACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTgcgc < 3:144727/149‑1 (MQ=255) gtatgtatACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTgcg > 4:42815/1‑148 (MQ=255) gtatACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATa > 5:61904/1‑149 (MQ=255) tataCAGAGCAACTCCTCGACCTGCTGCAAATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATAc > 2:180701/1‑149 (MQ=255) aCAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCACTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCt > 8:302347/1‑149 (MQ=255) agagCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTgg < 8:13002/149‑1 (MQ=255) agCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGc > 4:279402/1‑149 (MQ=255) gCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGcc > 2:54204/1‑149 (MQ=255) aaCTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCt < 2:156559/148‑1 (MQ=255) aCTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTgc > 4:108346/1‑149 (MQ=255) ctcctcGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTgcg > 1:356823/1‑149 (MQ=255) cctcGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCt > 8:301917/1‑149 (MQ=255) cGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGc > 2:220895/1‑149 (MQ=255) gACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGc < 2:356823/148‑1 (MQ=255) aCCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGccc < 3:279402/149‑1 (MQ=255) ctgctgCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCAt < 1:54204/149‑1 (MQ=255) ctgcAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCa < 1:220895/149‑1 (MQ=255) tgcAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCAc > 7:250274/1‑149 (MQ=255) cAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGc < 7:196390/139‑1 (MQ=255) cAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGc > 8:196390/1‑139 (MQ=255) ccGCGACTGGGCCGCCGTCGGCAACGCGCTGGAccagtcgcggcacagcggaatctgcagcaggtcgaggagttgctctgtatacatacgcccggcagtgtgtgcgccgccgccgtgcatcagaatgcgcacgccattgttggcca < 6:305601‑M2/146‑114 (MQ=255) ccGCGACTGGGCCGCCGTCGGCAACGCGCTGGAccagtcgcggcacagcggaatctgcagcaggtcgaggagttgctctgtatacatacgcccggcagtgtgtgcgccgccgccgtgcatcagaatgcgcacgccattgttggcca > 5:305601‑M2/1‑33 (MQ=255) ccGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGc < 3:42815/149‑1 (MQ=255) cgACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCt > 6:62566/1‑139 (MQ=255) cgACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCt < 5:62566/139‑1 (MQ=255) aCTGGGCCGCCGTCGGCAACGCGCTGGAccagtcgcggcacagcggaatctgcagcaggtcgaggagttgctctgtatacatacgcccggcagtgt < 7:238972‑M2/96‑69 (MQ=255) aCTGGGCCGCCGTCGGCAACGCGCTGGAccagtcgcggcacagcggaatctgcagcaggtcgaggagttgctctgtatacatacgcccggcagtgt > 8:238972‑M2/1‑28 (MQ=255) cTGGtccagcgcgttgccgacggcggcccagtcgcggcacagcggaatctgcagcaggtcgaggagttgctctgtatacatacgcccggcagtgtgtgcgccgccgccgtg > 6:175256‑M1/1‑4 (MQ=255) cTGGtccagcgcgttgccgacggcggcccagtcgcggcacagcggaatctgcagcaggtcgaggagttgctctgtatacatacgcccggcagtgtgtgcgccgccgccgtg < 5:175256‑M1/111‑108 (MQ=255) cTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAAcc < 6:61904/149‑1 (MQ=255) gggCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCGTCCACTCGCTGGCTCGGGTGCTCAACCCg > 6:81514/1‑149 (MQ=255) | GTCACCTGCCCTGGTACCTGCTGGCCGCCAAGT‑GCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCG > NC_002947/4505534‑4505829 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |