New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4505682	45 (0.790)	4 (0.070)	4/252	NT	8.5%	coding (456/1002 nt)	PP_3997	glycosyl transferase
	?	NC_002947	= 4505705	43 (0.780)					coding (479/1002 nt)	PP_3997	glycosyl transferase

CAAGTGCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCGCTGGGCGCTCGCTGTGGATTGCA  >  NC_002947/4505562‑4505852                                                                                                                                                |                                                                                                                                                    cAAGTGCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGaccagc                                                                                                                                                <  6:201598/149‑1 (MQ=255) cAAGTGCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGaccagc                                                                                                                                                >  4:144727/1‑149 (MQ=255)                  aTGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCAttcttc                                                                                                                               <  1:202972/149‑1 (MQ=255)                   tGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTcc                                                                                                                              >  3:163874/1‑149 (MQ=255)                   tGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCAGTGCCGCGACTGGGCCGCCGACGGCAACGCGCTGGACCAGCACCAGCTGGCAttcttca                                                                                                                              >  5:263378/1‑148 (MQ=255)                     gCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTccc                                                                                                                             <  2:188561/148‑1 (MQ=255)                             aTTCTGATGCACGGCGGCGGCGCACACACTGCCGTGCGAATGTATACAGAGCAACTCCTAGACCTGCTGCAGATACCGCTGTGCAGCGACTGTGCCTCCGTCGGCACAGCGCTGGACCAGCACAAGATGGCATTCTTCCCTCTGCACGa                                                                                                                    >  7:320936/1‑149 (MQ=255)                             aTTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGa                                                                                                                    >  4:105616/1‑149 (MQ=255)                               tCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTcc                                                                                                                              <  7:328038/137‑1 (MQ=255)                               tCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAAATCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTcc                                                                                                                              >  8:328038/1‑137 (MQ=255)                                   aTGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTgg                                                                                                                <  5:175125/147‑1 (MQ=255)                                      cACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGAccag                                                                                                                                                 >  6:175256‑M2/1‑107 (MQ=255)                                      cACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGAccag                                                                                                                                                 <  5:175256‑M2/111‑5 (MQ=255)                                                            ccGGGCTTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGAc                                                                                     <  8:52420/149‑1 (MQ=255)                                                            ccGGGCGTATGTATACAGAGCAACTCCGCGACCTGCGGCAGAGTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGAc                                                                                     <  8:299113/149‑1 (MQ=255)                                                               ggCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGa                                                                                          <  3:226159/141‑1 (MQ=255)                                                               ggCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGa                                                                                          >  4:226159/1‑141 (MQ=255)                                                                  gtatgtatACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTgcgc                                                                               <  3:144727/149‑1 (MQ=255)                                                                  gtatgtatACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTgcg                                                                                >  4:42815/1‑148 (MQ=255)                                                                      gtatACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATa                                                                           >  5:61904/1‑149 (MQ=255)                                                                       tataCAGAGCAACTCCTCGACCTGCTGCAAATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATAc                                                                          >  2:180701/1‑149 (MQ=255)                                                                          aCAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCACTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCt                                                                       >  8:302347/1‑149 (MQ=255)                                                                            agagCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTgg                                                                     <  8:13002/149‑1 (MQ=255)                                                                              agCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGc                                                                   >  4:279402/1‑149 (MQ=255)                                                                               gCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGcc                                                                  >  2:54204/1‑149 (MQ=255)                                                                                 aaCTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCt                                                                 <  2:156559/148‑1 (MQ=255)                                                                                  aCTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTgc                                                               >  4:108346/1‑149 (MQ=255)                                                                                   ctcctcGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTgcg                                                              >  1:356823/1‑149 (MQ=255)                                                                                     cctcGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCt                                                            >  8:301917/1‑149 (MQ=255)                                                                                        cGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGc                                                         >  2:220895/1‑149 (MQ=255)                                                                                         gACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGc                                                         <  2:356823/148‑1 (MQ=255)                                                                                          aCCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGccc                                                       <  3:279402/149‑1 (MQ=255)                                                                                            ctgctgCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCAt                                                     <  1:54204/149‑1 (MQ=255)                                                                                               ctgcAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCa                                                  <  1:220895/149‑1 (MQ=255)                                                                                                tgcAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCAc                                                 >  7:250274/1‑149 (MQ=255)                                                                                                  cAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGc                                                         >  8:196390/1‑139 (MQ=255)                                                                                                  cAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGc                                                         <  7:196390/139‑1 (MQ=255)                                                                                                                ccGCGACTGGGCCGCCGTCGGCAACGCGCTGGAccagtcgcggcacagcggaatctgcagcaggtcgaggagttgctctgtatacatacgcccggcagtgtgtgcgccgccgccgtgcatcagaatgcgcacgccattgttggcca                                    >  5:305601‑M2/1‑33 (MQ=255)                                                                                                                ccGCGACTGGGCCGCCGTCGGCAACGCGCTGGAccagtcgcggcacagcggaatctgcagcaggtcgaggagttgctctgtatacatacgcccggcagtgtgtgcgccgccgccgtgcatcagaatgcgcacgccattgttggcca                                    <  6:305601‑M2/146‑114 (MQ=255)                                                                                                                ccGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGc                                 <  3:42815/149‑1 (MQ=255)                                                                                                                   cgACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCt                                        >  6:62566/1‑139 (MQ=255)                                                                                                                   cgACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCt                                        <  5:62566/139‑1 (MQ=255)                                                                                                                     aCTGGGCCGCCGTCGGCAACGCGCTGGAccagtcgcggcacagcggaatctgcagcaggtcgaggagttgctctgtatacatacgcccggcagtgt                                                                                 <  7:238972‑M2/96‑69 (MQ=255)                                                                                                                     aCTGGGCCGCCGTCGGCAACGCGCTGGAccagtcgcggcacagcggaatctgcagcaggtcgaggagttgctctgtatacatacgcccggcagtgt                                                                                 >  8:238972‑M2/1‑28 (MQ=255)                                                                                                                      cTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAAcc                           <  6:61904/149‑1 (MQ=255)                                                                                                                        gggCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCGTCCACTCGCTGGCTCGGGTGCTCAACCCg                         >  6:81514/1‑149 (MQ=255)                                                                                                                            cgccgTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCGCTgg                     <  1:180701/149‑1 (MQ=255)                                                                                                                             gccgTCGGGAACGCGCTGGACCAGCACCAGCTGGCATTGTTCCCGCAGCTCGTCTGGGCGGCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCGCTggg                    <  6:263378/149‑1 (MQ=255)                                                                                                                                        cgcgCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCGCTGGGCGCTCGCtgtg         <  6:156599/149‑1 (MQ=255)                                                                                                                                           gcTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCGCTGGGCGCTCGCTGTGGAt      <  4:163874/149‑1 (MQ=255)                                                                                                                                           gcTGGACCAGCACCAGCTGGCATTCTCCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCGCTGGGCGCTCGCTGTGGAt      >  4:56463/1‑149 (MQ=255)                                                                                                                                            cTGGACCAGCACCAGCTGGCATTCTCCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCGCTGGGCGCTCGCTGTGGAtt     <  3:56463/149‑1 (MQ=255)                                                                                                                                               gACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCGTCCACTCGCTGGCTCGGGTGCTCAACCCGCTGGGCGCTCGCTGTGGATTGCa  <  5:81514/149‑1 (MQ=255)                                                                                                                                               gACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCGCTGGGCGCTCGCTGTGGATTGCa  <  7:302347/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                    CAAGTGCCTGGCCAACAATGGCGTGCGCATTCTGATGCACGGCGGCGGCGCACACACTGCCGGGCGTATGTATACAGAGCAACTCCTCGACCTGCTGCAGATTCCGCTGTGCCGCGACTGGGCCGCCGTCGGCAACGCGCTGGACCAGCACCAGCTGGCATTCTTCCCGCTGCACGACTGGGCGCCGCAGCTGCAACGCATGATCGACCTGCGCAATACCCTGGGCCTGCGCTCGCCCATCCACTCGCTGGCTCGGGTGCTCAACCCGCTGGGCGCTCGCTGTGGATTGCA  >  NC_002947/4505562‑4505852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.