New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4805570 =	33 (0.580)	4 (0.080)	3/244	NT	10.5%	coding (2322/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase
	?	NC_002947	4805636 =	37 (0.700)					coding (2256/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase

AACTGTGGTGGTTGAGCACCTGCGTCTCCAAGGTGCCTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCGGCCCAGCTCCAGCGGTTGAAGCCGTGCACGCTC  >  NC_002947/4805422‑4805717                                                                                                                                                     |                                                                                                                                                    aaCTGTGGTGGTTGAGCACCTGCGTCTCCAAGGTGCCTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAg                                                                                                                                                     >  2:28207/1‑149 (MQ=255)     gcgccgattccgtttgcccagctggcgcagaaggcccacgacatggggctggttaccggcgtgagcgtgcacggcttcaaccgctggagctgggccgaggccgactttgtcatcgatggcgtgcgcgagcgcttcccgctcgatGcc                                                                                                                                                   >  6:76652‑M1/145‑147 (MQ=255)     gcgccgattccgtttgcccagctggcgcagaaggcccacgacatggggctggttaccggcgtgagcgtgcacggcttcaaccgctggagctgggccgaggccgactttgtcatcgatggcgtgcgcgagcgcttcccgctcgatGcc                                                                                                                                                   >  6:81854‑M1/145‑147 (MQ=255)       ccgattccgtttgcccagctggcgcagaaggcccacgacatggggctggttaccggcgtgagcgtgcacggcttcaaccgctggagctgggctcgaggccgactttgtcatcgatggcgtgcgcgagcgcttcccgctcgatGCCATgg                                                                                                                                               >  1:98778‑M1/143‑149 (MQ=255)           gtTGAGCACCTGCGTCTCCAAGGTGCCTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGc                                                                                                                                           <  1:28207/149‑1 (MQ=255)           gtTGAGCACCTGCGTCTCCAAGGTGCCTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGc                                                                                                                                           >  3:262942/1‑149 (MQ=255)                        gTCTCCAAGGTGCCTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTAAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCct                                                                                                                               >  5:219816/1‑148 (MQ=255)                         tctcCAAGGTGCCTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCcttc                                                                                                                             >  2:203246/1‑149 (MQ=255)                            ccAAGGTGCCTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTg                                                                                                                          <  2:220792/149‑1 (MQ=255)                              aaGGTGCCTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGc                                                                                                                        <  5:60982/149‑1 (MQ=255)                                   gCCTTTGTTGATCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCa                                                                                                                   >  5:8799/1‑149 (MQ=255)                                    ccTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCAt                                                                                                                                                 >  1:126686/1‑118 (MQ=255)                                    ccTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCAt                                                                                                                                                 <  2:126686/118‑1 (MQ=255)                                           tgaccttgacctCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCa                                                                                                           >  1:25097/1‑149 (MQ=255)                                           tgaccttgacctCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCa                                                                                                           >  3:358397/1‑149 (MQ=255)                                              ccttgacctCGACGATGGTCGCCACAGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCg                                                                                                        <  6:219816/149‑1 (MQ=255)                                                 tgacctCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCAt                                                                                                                                                 <  2:7446/105‑1 (MQ=255)                                                 tgacctCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCAt                                                                                                                                                 >  1:7446/1‑105 (MQ=255)                                                    gctggttaccggcgtgagcgtgcacggcttcaaccgctggagctgggccgaggccgactttgtcatcgatggcgtgcgcgagcgcttcccgctcgatGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTAt                                                                                                  <  7:157525‑M1/52‑1 (MQ=255)                                                     ctCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTg                                                                                                                          <  7:17381/124‑1 (MQ=255)                                                     ctCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTg                                                                                                                          >  8:17381/1‑124 (MQ=255)                                                     ctCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTAtt                                                                                                 >  3:311401/1‑149 (MQ=255)                                                      tCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCa                                                                                                                   <  5:300317/130‑1 (MQ=255)                                                      tCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCa                                                                                                                   >  6:300317/1‑130 (MQ=255)                                                                tCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATg                                                                                      >  5:323834/1‑149 (MQ=255)                                                                    agcgtgcacggcttcaaccgctggagctgggccgaggccgactttgtcatcgatggcgtgcgcgagcgcttcccgctcgatGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCa                                                                                   >  8:157525‑M1/82‑148 (MQ=255)                                                                      ccGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATc                                                                                 >  6:364164/1‑148 (MQ=255)                                                                           cTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCgg                                                                           <  4:311401/149‑1 (MQ=255)                                                                           acggcttcaaccgctggagctgggccgaggccgactttgtcatcgatggcgtgcgcgagcgcttcccgctcgatGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCa                                                                                   <  6:96101‑M1/67‑1 (MQ=255)                                                                           acggcttcaaccgctggagctgggccgaggccgactttgtcatcgatggcgtgcgcgagcgcttcccgctcgatGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCa                                                                                   >  5:96101‑M1/75‑141 (MQ=255)                                                                             gtagtcGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCggg                                                                          >  1:31930/1‑148 (MQ=255)                                                                              tagtagGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCggg                                                                          >  4:174789/1‑147 (MQ=255)                                                                              tagtagGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGaa                                                                        <  8:220431/149‑1 (MQ=255)                                                                              tagtagGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGaa                                                                        <  1:203246/149‑1 (MQ=255)                                                                                         cATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCa                                                             >  2:147665/1‑149 (MQ=255)                                                                                             gCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGc                                                          >  2:357485/1‑148 (MQ=255)                                                                                                   ttCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGAt                                                   >  4:340575/1‑149 (MQ=255)                                                                                                      aGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGa                                                 >  3:122924/1‑148 (MQ=255)                                                                                                                    gTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGtcggcctcgg                                  <  1:357485/149‑1 (MQ=255)                                                                                                                        gCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGtcggcctcggcc                                >  7:191591/1‑147 (MQ=255)                                                                                                                        gCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCGGCCCa                              <  8:191591/149‑1 (MQ=255)                                                                                                                          cGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCAc                                                            <  4:234625/117‑1 (MQ=255)                                                                                                                          cGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCAc                                                            >  3:234625/1‑117 (MQ=255)                                                                                                                                 tGCGGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCAAATTGGCATTCCCCGCACCATCGCAGTATTTCACCGGCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCGTCGGCGCAGCTCCAGCg                     >  8:67190/1‑149 (MQ=255)                                                                                                                                              ggTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCGGCCCAGCTCCAGCGGTTGAAGCCGTg         >  2:30312/1‑148 (MQ=255)                                                                                                                                                     GCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCGGCCCAGCTCCAGCGGTTGAAGCCGTGCACGCTc  >  5:364164‑M1/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AACTGTGGTGGTTGAGCACCTGCGTCTCCAAGGTGCCTTTGTTGACCTTGACCTCGACGATGGTCGCCACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCGGCCCAGCTCCAGCGGTTGAAGCCGTGCACGCTC  >  NC_002947/4805422‑4805717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.