New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4805570 =	33 (0.580)	4 (0.080)	3/244	NT	10.5%	coding (2322/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase
	?	NC_002947	4805636 =	37 (0.700)					coding (2256/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase

CACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTGCGCCAGCTGGGCAAACGGAATCGGCGC  >  NC_002947/4805489‑4805779                                                                                                                                                    |                                                                                                                                                  agcgtgcacggcttcaaccgctggagctgggccgaggccgactttgtcatcgatggcgtgcgcgagcgcttcccgctcgatGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCa                                                                                                                                                   >  8:157525‑M1/82‑148 (MQ=255)   ccGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATc                                                                                                                                                 >  6:364164/1‑148 (MQ=255)        cTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCgg                                                                                                                                           <  4:311401/149‑1 (MQ=255)        acggcttcaaccgctggagctgggccgaggccgactttgtcatcgatggcgtgcgcgagcgcttcccgctcgatGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCa                                                                                                                                                   >  5:96101‑M1/75‑141 (MQ=255)        acggcttcaaccgctggagctgggccgaggccgactttgtcatcgatggcgtgcgcgagcgcttcccgctcgatGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCa                                                                                                                                                   <  6:96101‑M1/67‑1 (MQ=255)          gtagtcGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCggg                                                                                                                                          >  1:31930/1‑148 (MQ=255)           tagtagGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCggg                                                                                                                                          >  4:174789/1‑147 (MQ=255)           tagtagGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGaa                                                                                                                                        <  1:203246/149‑1 (MQ=255)           tagtagGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGaa                                                                                                                                        <  8:220431/149‑1 (MQ=255)                      cATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCa                                                                                                                             >  2:147665/1‑149 (MQ=255)                          gCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGc                                                                                                                          >  2:357485/1‑148 (MQ=255)                                ttCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGAt                                                                                                                   >  4:340575/1‑149 (MQ=255)                                   aGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGa                                                                                                                 >  3:122924/1‑148 (MQ=255)                                                 gTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGtcggcctcg‑g                                                                                                 <  1:357485/149‑1 (MQ=255)                                                     gCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGtcggcctcg‑gcc                                                                                               >  7:191591/1‑147 (MQ=255)                                                     gCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCa                                                                                             <  8:191591/149‑1 (MQ=255)                                                       cGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCAc                                                                                                                            <  4:234625/117‑1 (MQ=255)                                                       cGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCAc                                                                                                                            >  3:234625/1‑117 (MQ=255)                                                              tGCGGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCAAATTGGCATTCCCCGCACCATCGCAGTATTTCACCGGCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCGTCG‑GCGCA‑GCTCCAGCg                                                                                   >  8:67190/1‑149 (MQ=255)                                                                           ggTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTg                                                                       >  2:30312/1‑148 (MQ=255)                                                                                 tgccatggcggtgaaatacggcgatggtgcggtgaatgccaagaaggcgcagatgggcagccatggcATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGt                                                                        >  5:96101‑M2/68‑141 (MQ=255)                                                                                 tgccatggcggtgaaatacggcgatggtgcggtgaatgccaagaaggcgcagatgggcagccatggcATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGt                                                                        <  6:96101‑M2/74‑1 (MQ=255)                                                                                 tgccatggcggtgaaatacggcgatggtgcggtgaatgccaagaaggcgcagatgggcagccatggcATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCt                                                                 >  8:157525‑M2/68‑148 (MQ=255)                                                                                  GCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTc                                                                >  5:364164‑M1/1‑148 (MQ=255)                                                                                    CATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACg                                                             >  4:262942‑M1/1‑149 (MQ=255)                                                                                     ATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGc                                                            >  6:323834‑M1/1‑149 (MQ=255)                                                                                     ATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGc                                                            <  2:93973‑M1/149‑1 (MQ=255)                                                                                        GCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCg                                                          >  2:31930‑M1/1‑148 (MQ=255)                                                                                            cccATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTa                                                       <  6:8799/147‑1 (MQ=255)                                                                                             ccATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAAc                                                     >  7:198639/1‑148 (MQ=255)                                                                                              cATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCa                                                   >  1:155507/1‑149 (MQ=255)                                                                                                atacggcgatggtgcggtgaatgccaagaaggcgcagatgggcagccatggcATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGc                                                 <  7:157525‑M2/97‑1 (MQ=255)                                                                                                 cTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCCCGCTCACGCCGGTAACCAGcc                                                >  7:121655/1‑149 (MQ=255)                                                                                                     gcCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCAt                                            >  4:210665/1‑149 (MQ=255)                                                                                                     gcCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCAt                                            <  3:340575/149‑1 (MQ=255)                                                                                                             ggCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCACGCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTg                                      <  1:93973/148‑1 (MQ=255)                                                                                                             ggCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTgg                                     <  4:358397/148‑1 (MQ=255)                                                                                                             ggCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTgg                                     <  1:147665/148‑1 (MQ=255)                                                                                                             ggCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTgg                                     <  2:25097/148‑1 (MQ=255)                                                                                                             ggCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTg                                      <  3:210665/147‑1 (MQ=255)                                                                                                                    aCCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTg                             >  8:76246/1‑149 (MQ=255)                                                                                                                    aCCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTg                             >  6:181628/1‑149 (MQ=255)                                                                                                                      cGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCAt                                            >  6:24930/1‑132 (MQ=255)                                                                                                                      cGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCAt                                            <  5:24930/132‑1 (MQ=255)                                                                                                                        cacaATCGCCGTATTTCACCGCCATGGCATCCAGCCGCAAGCGCTCGAGCACGCCATAGATGACAAAGTCGTCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCtcagc                          >  4:319052/1‑144 (MQ=255)                                                                                                                            aTCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTGCGCCAGCt                     <  3:174789/149‑1 (MQ=255)                                                                                                                               gCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTg                             >  2:359513/1‑138 (MQ=255)                                                                                                                               gCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTg                             <  1:359513/138‑1 (MQ=255)                                                                                                                               gCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTGCGCCAGCTgg                   <  4:122924/148‑1 (MQ=255)                                                                                                                                ccGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGaa                                                                             >  2:17696/1‑89 (MQ=255)                                                                                                                                         aCCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTGCGCCAGCTGGGCAAACGGAAt        >  6:271987/1‑149 (MQ=255)                                                                                                                                           cGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTGCGCCAGCTGGGCAAACGGAATCg      <  2:155507/149‑1 (MQ=255)                                                                                                                                             ccatggcATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCGAGCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTGCGCCAGCTGGGCAAACGGAATCgg     >  1:98778‑M2/8‑149 (MQ=255)                                                                                                                                                 ggcATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTGCGCCAGCTGGGCAAACGGAATCGgcgc  >  6:81854‑M2/4‑147 (MQ=255)                                                                                                                                                 ggcATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTGCGCCAGCTGGGCAAACGGAATCGgcgc  >  6:76652‑M2/4‑147 (MQ=255)                                                                                                                                                    |                                                                                                                                                  CACCGGGCTGTAGTAGGTGACCATGGCATTGTTCAGCTGGGTGTCGGGGTAGGCCGCATTCTGCCGGTCGAGCAGGTGATAGCCATGGCTGCCCATCTGCGCCTTCTTGGCATTCACCGCACCATCGCCGTATTTCACCGCCATGGCATCGAGCGGGAAGCGCTCGCGCACGCCATCGATGACAAAGTCGGCCTCG‑GCCCA‑GCTCCAGCGGTTGAAGCCGTGCACGCTCACGCCGGTAACCAGCCCCATGTCGTGGGCCTTCTGCGCCAGCTGGGCAAACGGAATCGGCGC  >  NC_002947/4805489‑4805779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.