BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5032855	84 (1.480)	5 (0.090)	5/248	NT	6.0%	intergenic (+20/‑390)	PP_4435/PP_4437	hypothetical protein/transposase
*	?	NC_002947	= 5032893	77 (1.420)	5 (0.090)	5/248	NT	6.0%	intergenic (+58/‑352)	PP_4435/PP_4437	hypothetical protein/transposase

Only 100 of 101 total aligned reads displayed.

CATGAACGAGGTTTGGGAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGACATCCACAAAC  >  NC_002947/5032712‑5033001

cATGAACGAGGTTTGGGAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGgcg                                                                                                                                                >  1:343287/1‑149 (MQ=255)

 aTGAACGAGGTTTGGGAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGgcgc                                                                                                                                               >  5:60477/1‑149 (MQ=255)

 aTGAACGAGGTTTGGGAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGgcgc                                                                                                                                               >  5:275463/1‑149 (MQ=255)

 aTGAACGAGGTTTGGGAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGgcgc                                                                                                                                               <  7:332267/149‑1 (MQ=255)

 aTGAACGAGGTTTGGGAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGgcgc                                                                                                                                               <  1:314906/149‑1 (MQ=255)

 aTGAACGAGGTTTGGGAAGAGAGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGgcgc                                                                                                                                               >  8:65478/1‑149 (MQ=255)

     aCGAGGTTTGGGAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTAt                                                                                                                                           <  2:343287/149‑1 (MQ=255)

          gTTTGGGAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCgagcgcctctgacct                                                                                                                                      >  3:43118‑M1/1‑134 (MQ=255)

              gggTAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCGGGCAGGCGCCTATCCAGCGTg                                                                                                                                   <  8:209706/148‑1 (MQ=255)

                gAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGt                                                                                                                                 >  7:306909/1‑148 (MQ=255)

                gAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGt                                                                                                                                 >  4:99270/1‑148 (MQ=255)

                  agagTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTaa                                                                                                                               <  6:60477/148‑1 (MQ=255)

                     gTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCCAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAgg                                                                                                                           >  1:347806/1‑149 (MQ=255)

                       gggTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGt                                                                                                                          <  3:99270/148‑1 (MQ=255)

                        ggTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGt                                                                                                                          >  1:26353/1‑147 (MQ=255)

                        ggTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTc                                                                                                                         <  6:275463/148‑1 (MQ=255)

                        ggTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCa                                                                                                                        <  3:210728/149‑1 (MQ=255)

                            gcgGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCagag                                                                                                                     <  4:263385/148‑1 (MQ=255)

                             cgGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑gc                                                                                                                  >  8:238952/1‑149 (MQ=255)

                                 aacacAGGCTCGCGCAGGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTc                                                                                                              >  2:115027/5‑149 (MQ=255)

                                   cacagGCTCGCGCAGGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCgc                                                                                                            <  6:7137‑M2/147‑3 (MQ=255)

                                   cacagGCTCGCGCAGGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCgc                                                                                                            <  7:107881‑M2/147‑3 (MQ=255)

                                    tCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCgagcgcctctgacctgttaccaggctgcataggcgcctgcc                                                                                                            >  6:361140‑M1/1‑108 (MQ=255)

                                            cTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCgagcgcctctgacctgttaccaggctgcataggcgcctgccgggtgcgc                                                                                                    <  5:361140‑M1/149‑50 (MQ=255)

                                               cgcgAGGCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCgagcgcctctgacctgttaccaggctggataggcgcctgccgggtgcgctt                                                                                                  <  2:337127‑M1/148‑52 (MQ=255)

                                                  gAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAAt                                                                                             >  5:87846/1‑149 (MQ=255)

                                                       tgtgTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAg‑g                                                                                                                   <  2:124652/122‑1 (MQ=255)

                                                       tgtgTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAg‑g                                                                                                                   >  1:124652/1‑122 (MQ=255)

                                                              aGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCgagcgcctctgacctgttaccaggctggataggcgcctgccgggtgcgcttttaagcgtcaggcga                                                                                   <  4:43118‑M1/148‑67 (MQ=255)

                                                              aGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGaa                                                                                  >  7:197218/1‑148 (MQ=255)

                                                              aGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAAc                                                                                 <  6:87846/149‑1 (MQ=255)

                                                                gcggcTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACa                                                                                >  2:194936/1‑148 (MQ=255)

                                                                      aTGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑gcg                                                                                                                 <  4:224428/109‑1 (MQ=255)

                                                                      aTGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCAt                                                                         >  4:174844/1‑149 (MQ=255)

                                                                       tGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGTTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATg                                                                        <  8:113840/149‑1 (MQ=255)

                                                                         ttCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATg                                                                        >  1:119373/1‑147 (MQ=255)

                                                                         ttCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATg                                                                        <  2:119373/147‑1 (MQ=255)

                                                                         ttCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGaa                                                                      >  3:173431/1‑149 (MQ=255)

                                                                          tCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAAc                                                                     >  2:342785/1‑149 (MQ=255)

                                                                           caagccaagcCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTg                                                                                                                                   >  6:171344/1‑87 (MQ=255)

                                                                           caagccaagcCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTg                                                                                                                                   <  5:171344/87‑1 (MQ=255)

                                                                            aagccaagccTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAAcc                                                                    <  8:197218/148‑1 (MQ=255)

                                                                               ccaagccTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGt                                                                <  7:65478/149‑1 (MQ=255)

                                                                               ccaagccTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGt                                                                >  5:130748/1‑149 (MQ=255)

                                                                                caagccTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTg                                                               >  7:132559/1‑149 (MQ=255)

                                                                                 aagccTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAGAGCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACa                                                                                <  1:57736/132‑1 (MQ=255)

                                                                                 aagccTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACa                                                                                >  2:57736/1‑131 (MQ=255)

                                                                                 aagccTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGc                                                              >  2:46472/1‑149 (MQ=255)

                                                                                 aagccTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGc                                                              >  6:318799/1‑149 (MQ=255)

                                                                                        cTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGcc                                                         <  8:132559/147‑1 (MQ=255)

                                                                                           gTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACa                                                     <  5:7137/148‑1 (MQ=255)

                                                                                           gTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACa                                                     <  6:130748/148‑1 (MQ=255)

                                                                                            ttGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACAtt                                                   <  7:238952/149‑1 (MQ=255)

                                                                                               tgaTGTACGTAGTAGCAGCAATCGCCTGACTCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGTGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTaaa                                                <  5:74805/148‑1 (MQ=255)

                                                                                               agaTGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCAc                                                                  <  3:158463/131‑1 (MQ=255)

                                                                                               agaTGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCAc                                                                  >  4:158463/1‑131 (MQ=255)

                                                                                               agaTGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTa                                                  >  7:243996/1‑147 (MQ=255)

                                                                                                gaTGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTa                                                  <  7:72503/146‑1 (MQ=255)

                                                                                                 aTGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTaaa                                                >  6:74805/1‑147 (MQ=255)

                                                                                                    tCCGTAGTAGCAGCAATCGCCTCACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGt                                            <  7:142850/148‑1 (MQ=255)

                                                                                                     ccGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGtt                                           >  2:110490/1‑148 (MQ=255)

                                                                                                      cGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGATATTAAAGAGttt                                          <  1:304324/148‑1 (MQ=255)

                                                                                                      cGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTc                                         <  4:173431/149‑1 (MQ=255)

                                                                                                      cGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTc                                         <  3:174844/149‑1 (MQ=255)

                                                                                                       gtagtaGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTca                                        <  8:306909/149‑1 (MQ=255)

                                                                                                        tagtagCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTcaa                                       <  2:26353/149‑1 (MQ=255)

                                                                                                           tagCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTaa                                                 <  7:30292/136‑1 (MQ=255)

                                                                                                           tagCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTaa                                                 >  8:30292/1‑136 (MQ=255)

                                                                                                             gcagcaATCGCCTGACGCTTTAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCt                                                                                                 >  6:186301/1‑86 (MQ=255)

                                                                                                             gcagcaATCGCCTGACGCTTTAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCt                                                                                                 <  5:186301/86‑1 (MQ=255)

                                                                                                              cagcaATCGCCTGACGCTTAAAAGCGCACCCAGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAagag                                 >  1:277169/1‑149 (MQ=255)

                                                                                                                 caATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTc                              <  8:107881/149‑1 (MQ=255)

                                                                                                                  aaTCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCTGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGc                                >  7:45149/1‑146 (MQ=255)

                                                                                                                  aaTCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCTGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGc                                <  8:45149/146‑1 (MQ=255)

                                                                                                                  aaTCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGttt                                          <  6:39378/136‑1 (MQ=255)

                                                                                                                  aaTCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGttt                                          >  5:39378/1‑136 (MQ=255)

                                                                                                                    tCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCgccgggtgcgcttttaagcgtcaggcgattgctgctactacggacatctcaacgagcaggcttggcttgaacatagccgcct                            <  4:43118‑M2/148‑83 (MQ=255)

                                                                                                                      gCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAACCTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGc                         >  3:31034/1‑149 (MQ=255)

                                                                                                                           aCGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGTGTTTCAACAAGAGCTCATCGCTATCa                    <  1:194936/149‑1 (MQ=255)

                                                                                                                             gCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAaga                                              >  4:192361/1‑121 (MQ=255)

                                                                                                                             gCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAaga                                              <  3:192361/121‑1 (MQ=255)

                                                                                                                              catAAAAGCGCACCCGTCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTc                                         <  5:281527/123‑1 (MQ=255)

                                                                                                                              cTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGgc                 >  3:108607/1‑149 (MQ=255)

                                                                                                                              cTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCATGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATTAACCACCTGCTTGCAGACATTAAAGAGTTTc                                         >  6:281527/1‑125 (MQ=255)

                                                                                                                               ttAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGGCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGgcg                >  5:22009/1‑149 (MQ=255)

                                                                                                                                 aaaaGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGgcgc               <  1:110490/148‑1 (MQ=255)

                                                                                                                                 aaaaGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAAAAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGgcg                <  8:150236/147‑1 (MQ=255)

                                                                                                                                   aaGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCgccgggtgcgcttttaagcgtcaggcgattgctgctactacggacatctcaacgagcaggcttggcttgaacatagccgcctcaacacagcctcgcg             <  2:337127‑M2/148‑98 (MQ=255)

                                                                                                                                     gcgcACCCGGCAGGCGCCTATGCAGCCTGGTAACAGGTCAGAG‑GCGCTCgccgggtgcgcttttaagcgtcaggcgattgctgctactacggacatctcaacgagcaggcttggcttgaacatagccgcctcaacacaggctcgcgcag          <  5:361140‑M2/149‑101 (MQ=255)

                                                                                                                                       gcACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGACATc         >  1:51048/1‑148 (MQ=255)

                                                                                                                                         aCCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAaga                                              <  4:145028/109‑1 (MQ=255)

                                                                                                                                         aCCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAaga                                              >  3:145028/1‑109 (MQ=255)

                                                                                                                                          cccGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGACATCcaca     <  5:318799/149‑1 (MQ=255)

                                                                                                                                          cccGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGACATCcac      >  8:291493/1‑148 (MQ=255)

                                                                                                                                           ccGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTaaa                                                <  5:79807/105‑1 (MQ=255)

                                                                                                                                           ccGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTaaa                                                >  6:79807/1‑105 (MQ=255)

                                                                                                                                           ccGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGACATCCACaa    <  1:46472/149‑1 (MQ=255)

                                                                                                                                             ggCAGGCGCCTATGCAGCCTGGTAACAGGTCAGAG‑GCGCTCgccgggtgcgcttttaagcgtcaggcgattgctgctactacggacatctcaacgagcaggcttggcttgaacatagccgcctcaacacaggctcgcgcaggagcctga  >  6:361140‑M2/1‑41 (MQ=255)

                                                                                                                                              gCgagcgcctctgacctgttaccaggctggataggcgcctgccgggtgcgcttttaagcgtcaggcgattgctgctactacggacatctcaacgagcaggcttggcttgaacatagccgcctcaacacaggctcctgcgcgagcctgtg  <  7:107881‑M1/149‑148 (MQ=255)

                                                                                                                                              gCgagcgcctctgacctgttaccaggctggataggcgcctgccgggtgcgcttttaagcgtcaggcgattgctgctactacggacatctcaacgagcaggcttggcttgaacatagccgcctcaacacaggctcctgcgcgagcctgtg  <  6:7137‑M1/149‑148 (MQ=255)

CATGAACGAGGTTTGGGAAGAGTGGGTCGCGGAAGGTCAGGCTCCTGCGCGAGCCTGTGTTGAGGCGGCTATGTTCAAGCCAAGCCTGCTCGTTGAGATGTCCGTAGTAGCAGCAATCGCCTGACGCTTAAAAGCGCACCCGGCAGGCGCCTATCCAGCCTGGTAACAGGTCAGAG‑GCGCTCGCCGGGCACCGCTAAATCGATCCAGGAACAAACTCATGAACCACGTGCTTGCCGACATTAAAGAGTTTCAACAAGAGCTCATCGCTATCAGGCGCGACATCCACAAAC  >  NC_002947/5032712‑5033001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.