New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 556449	55 (0.970)	4 (0.080)	4/244	NT	6.9%	coding (51/540 nt)	rplE	50S ribosomal protein L5
	?	NC_002947	= 556455	57 (1.070)					coding (57/540 nt)	rplE	50S ribosomal protein L5

GTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCAAAAGCCGGTCGTGAC  >  NC_002947/556307‑556601                                                                                                                                                     |                                                                                                                                                    gTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGGGGTTGATGGTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGgaagaa                                                                                                                                                     <  5:262958/149‑1 (MQ=255)      tttCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAActtaa                                                                                                                                                >  2:220155‑M2/1‑144 (MQ=255)       ttCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAActtaag                                                                                                                                               <  2:32652‑M2/149‑7 (MQ=255)         cAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAActtaagc                                                                                                                                              >  2:361834‑M2/1‑141 (MQ=255)          aaaGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAActtaagct                                                                                                                                             >  3:154616‑M2/1‑140 (MQ=255)           aaGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGt                                                                                                                                           <  6:134018/149‑1 (MQ=255)            aGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTc                                                                                                                                          >  3:65244/1‑149 (MQ=255)             gTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTc                                                                                                                                          >  3:360229/1‑148 (MQ=255)                   gaCGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGt                                                                                                                                   >  8:78424/1‑148 (MQ=255)                     cGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTTCTAGGTAGAAGTCCTTGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGAt                                                                                                                                <  1:188325/149‑1 (MQ=255)                       gTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATgg                                                                                                                              <  7:78424/149‑1 (MQ=255)                       gTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATgg                                                                                                                              <  4:65244/149‑1 (MQ=255)                       gTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATg                                                                                                                               >  4:12299/1‑148 (MQ=255)                         aaaaaaaTTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGaa                                                                                                                            >  6:218082/1‑149 (MQ=255)                          aaaaaaTTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGTTCTTCcttaagcttaggagcgatttcgttc                                                                                                                            >  5:336256‑M2/1‑124 (MQ=255)                           aaaaaTTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGt                                                                                                                          >  8:90061/1‑149 (MQ=255)                                ttCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCcgc                                                                                                                     <  3:23729/149‑1 (MQ=255)                                      tCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGtt                                                                                                                <  5:218082/148‑1 (MQ=255)                                        ttCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑Ac                                                                                                                                     <  6:331094/125‑1 (MQ=255)                                        ttCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑Ac                                                                                                                                     >  5:331094/1‑125 (MQ=255)                                          cAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTAc                                                                                                              <  7:90061/146‑1 (MQ=255)                                             gTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTAcc                                                                                                             >  6:202879/1‑144 (MQ=255)                                                gACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCAc                                                                                                     >  4:326255/1‑149 (MQ=255)                                                   ccAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAATAACTTAAGCTGTCGA‑ACGTGAAGGAAGTTCCGCGCGTTACCAAGATCACCCt                                                                                                  <  1:32652/149‑1 (MQ=255)                                                     aaaaaGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTg                                                                                                 >  7:180615/1‑148 (MQ=255)                                                           cGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATgg                                                                                          >  2:86970/1‑149 (MQ=255)                                                            ggTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATggg                                                                                         <  1:86970/149‑1 (MQ=255)                                                             gTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGt                                                                                        <  3:12299/149‑1 (MQ=255)                                                              ttGATGCTTGAAGACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCTAGATCACGCTGAACATGGGt                                                                                        <  8:254397/148‑1 (MQ=255)                                                                  tGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTggg                                                                                   >  1:313267/1‑149 (MQ=255)                                                                  tGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTggg                                                                                   >  5:293573/1‑149 (MQ=255)                                                                  tGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTgg                                                                                    <  3:326255/148‑1 (MQ=255)                                                                  tGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCAACCTGAACATGGGTCTggg                                                                                   >  7:341063/1‑149 (MQ=255)                                                                     ttGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCg                                                                                 >  8:273554/1‑148 (MQ=255)                                                                       gAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGaa                                                                               <  3:354364/148‑1 (MQ=255)                                                                        aaCACTGCTAGGTAGAAGACCATGGCACGACTTAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGATCCGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATgg                                                                                          <  1:257355/137‑1 (MQ=255)                                                                        aaCACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTACTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATgg                                                                                          >  2:257355/1‑136 (MQ=255)                                                                         acacTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCg                                                                            <  5:202879/149‑1 (MQ=255)                                                                             tGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCg                                                                        >  3:136160/1‑149 (MQ=255)                                                                                  ggTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCAcc                                                                                                    >  6:220107/1‑116 (MQ=255)                                                                                  ggTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCAcc                                                                                                    <  5:220107/116‑1 (MQ=255)                                                                                       aagaCCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGaa                                                              <  6:293573/149‑1 (MQ=255)                                                                                        agaCCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGaaa                                                             <  8:180615/149‑1 (MQ=255)                                                                                              tGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATc                                                       <  4:360229/149‑1 (MQ=255)                                                                                                   cGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCa                                                  <  7:273554/149‑1 (MQ=255)                                                                                                        gAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTg                                             >  2:267380/1‑149 (MQ=255)                                                                                                         aaaGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGt                                            >  7:277841/1‑149 (MQ=255)                                                                                                           agagATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTg                                          >  6:52685/1‑149 (MQ=255)                                                                                                                 ttACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGAcc                                    >  1:117796/1‑149 (MQ=255)                                                                                                                    ccGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTGTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGGGCAGGCTGtt                                           >  6:337613/1‑139 (MQ=255)                                                                                                                    ccGGAACGAAATCCCTCCAAACCTTAAGGAACAACCTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAACATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGtt                                           <  5:337613/139‑1 (MQ=255)                                                                                                                     cGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTgg                                 >  7:105033/1‑148 (MQ=255)                                                                                                                        aaCGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATgg                                                                                          <  2:320655/88‑1 (MQ=255)                                                                                                                        aaCGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATgg                                                                                          >  1:320655/1‑88 (MQ=255)                                                                                                                                cGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCg                     >  6:75289/1‑149 (MQ=255)                                                                                                                                 gCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCg                     <  1:267380/148‑1 (MQ=255)                                                                                                                                     cTAAGCTTAAGGAAGAActtaagcttaggagcgatttcgttccggtaaatctctttcagtcgtgccatggtcttcta                                                                                         <  1:17846‑M2/77‑61 (MQ=255)                                                                                                                                     cTAAGCTTAAGGAAGAActtaagcttaggagcgatttcgttccggtaaatctctttcagtcgtgccatggtcttcta                                                                                         >  2:17846‑M2/1‑17 (MQ=255)                                                                                                                                     cTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCa                 >  4:66582/1‑148 (MQ=255)                                                                                                                                      tAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCaa                >  3:61455/1‑148 (MQ=255)                                                                                                                                       aaGCTTAAGGAAGAActtaagcttaggagcgatttcgttccggtaaatctctttcagtcgtgccatggtcttctacctagcagtgttcaagcatcaaccgctttttgggtcgacttgaagacacgaatttttttaccgtcttctacttt               <  4:117969‑M2/149‑135 (MQ=255)                                                                                                                                        aGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCAAAAg             <  2:313267/149‑1 (MQ=255)                                                                                                                                        aGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCAAAAg             <  8:341063/149‑1 (MQ=255)                                                                                                                                            tAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCAAAAGCCgg         >  1:184046/1‑149 (MQ=255)                                                                                                                                               ggAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCAAAAGCCGGTCg      >  6:118128/1‑149 (MQ=255)                                                                                                                                                gaagaaCTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTg                                             >  2:321092/1‑109 (MQ=255)                                                                                                                                                gaagaaCTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTg                                             <  1:321092/109‑1 (MQ=255)                                                                                                                                                gaagaaCTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGaa                               >  6:369608/1‑123 (MQ=255)                                                                                                                                                gaagaaCTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGaa                               <  5:369608/123‑1 (MQ=255)                                                                                                                                                 aagaaCTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCAAAAGCCGGTCGt     >  7:4924/1‑148 (MQ=255)                                                                                                                                                 aagaaCTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCAAAAGCCGGTCGTg    <  5:75289/149‑1 (MQ=255)                                                                                                                                                   gaaCTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCAAAAGCCGGTCGTGAc  <  3:66582/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGGAAGAACTTAAGCTGTCGA‑ACGTGATGGAAGTTCCGCGCGTTACCAAGATCACCCTGAACATGGGTCTGGGCGAAGCGATCGGCGACAAGAAAGTCATCGAGCACGCTGTTGCTGACCTGGAAAAGATCACCGGTCAAAAGCCGGTCGTGAC  >  NC_002947/556307‑556601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.