New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 91120342 (0.740)3 (0.060) 3/250 NT 6.6% coding (1711/2853 nt) fruB PTS fructose transporter subunit EI/HPr/IIA
?NC_002947 = 911239 45 (0.830)coding (1747/2853 nt) fruB PTS fructose transporter subunit EI/HPr/IIA

GCAGGCGCAGGTTGAACCCGAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGGCGCTGGCCGAGCGT  >  NC_002947/911094‑911385
                                                                                                                                                 |                                                                                                                                                  
gCAGGCGCAGGTTGAACCCGAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCggg                                                                                                                                                 <  4:25445‑M2/149‑4 (MQ=255)
       cAGGTGGAACCCGCGCACCCCTATGTGCTGGTGATGACCGAAGTCGGACCATCCGCTGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGGCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTggg                                                                                                                                          <  8:288629/149‑1 (MQ=255)
          gTTGAACCCGAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCa                                                                                                                                        >  3:19768/1‑148 (MQ=255)
                cccGAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACcag                                                                                                                                  >  4:113178/1‑148 (MQ=255)
                cccGAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGACACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACcag                                                                                                                                  >  6:82225/1‑148 (MQ=255)
                   gAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTgg                                                                                                                                           >  7:330029/1‑136 (MQ=255)
                   gAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTgg                                                                                                                                           <  8:330029/136‑1 (MQ=255)
                       aaCCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTc                                                                                                                          <  2:87776/149‑1 (MQ=255)
                           cTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGgcg                                                                                                                      >  4:196378/1‑149 (MQ=255)
                            tATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGgcgc                                                                                                                     >  3:24816/1‑149 (MQ=255)
                              tgtgCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCGGTGGTCGGcgcg                                                                                                                    <  8:86690/148‑1 (MQ=255)
                              tgtgCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCgg                                                                                                                   <  3:113178/149‑1 (MQ=255)
                              tgtgCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCgg                                                                                                                   <  7:102637/149‑1 (MQ=255)
                                       gatgaCCGAAATCGGTCCATCCAATGTCACCCGCCTGAACCCCAACCGGATTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAATGCAAACAACACCCGGCGGTTGGCAAAAACACCAGTCGACGGCCCgggaccaaac                                                                                                           >  8:228436/1‑141 (MQ=255)
                                           aCCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATAct                                                                                                      >  3:348253/1‑149 (MQ=255)
                                             cGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATActgc                                                                                                    >  5:57006/1‑149 (MQ=255)
                                                  tCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCGACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTg                                                                                               <  4:348253/149‑1 (MQ=255)
                                                    ggTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTg                                                                                               <  8:252201/147‑1 (MQ=255)
                                                    ggTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTg                                                                                               >  7:252201/1‑147 (MQ=255)
                                                    ggTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGga                                                                                             <  3:25445/149‑1 (MQ=255)
                                                    ggTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGga                                                                                             <  8:238882/149‑1 (MQ=255)
                                                          tCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTgg                                                                                       >  8:52096/1‑149 (MQ=255)
                                                            cGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGt                                                                                      <  3:196378/148‑1 (MQ=255)
                                                              aTGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTAGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTAcg                                                                                   <  8:178482/149‑1 (MQ=255)
                                                                   gcccgccTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCgct                                                                              <  6:57006/149‑1 (MQ=255)
                                                                    cccgccTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCgctg                                                                             <  4:19768/149‑1 (MQ=255)
                                                                           ggACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTc                                                                       >  4:288768/1‑148 (MQ=255)
                                                                             aCCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGAt                                                                    >  6:112040/1‑149 (MQ=255)
                                                                               cccAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATa                                                                                                        <  4:236768/111‑1 (MQ=255)
                                                                               cccAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATa                                                                                                        >  3:236768/1‑111 (MQ=255)
                                                                                 cAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGc                                                                 >  7:236102/1‑148 (MQ=255)
                                                                                    ccGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGc                                                             >  3:74456/1‑149 (MQ=255)
                                                                                           gCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCgtggtg                                                       <  4:74456/148‑1 (MQ=255)
                                                                                             cGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCgtggtgtgg                                                    >  6:338298/1‑149 (MQ=255)
                                                                                                 aTTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAg                                                >  5:149918/1‑149 (MQ=255)
                                                                                                        ccGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCgggcggtgacaatgccggcaacccggttggggtccaggcgggcgacatcggatggaccgacttcggtcatcaccagcac                                                                     <  6:134028‑M2/121‑80 (MQ=255)
                                                                                                        ccGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCgggcggtgacaatgccggcaacccggttggggtccaggcgggcgacatcggatggaccgacttcggtcatcaccagcac                                                                     >  5:134028‑M2/1‑42 (MQ=255)
                                                                                                          gCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCAcc                                       >  1:304334/1‑149 (MQ=255)
                                                                                                           cccAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCgggcggtgacaatgccggcaacccggttggggtccaggcgggcgacatcggatggaccgacttcggtcatcaccagcacatagggttgctcgggttcaacctgcgcctgc                                      <  7:325017‑M2/149‑111 (MQ=255)
                                                                                                           cccAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCg                                      >  4:314257/1‑149 (MQ=255)
                                                                                                                    gcgcCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGAt                             <  7:52096/149‑1 (MQ=255)
                                                                                                                     ggcaaCGGCCCACATTGCCATCGTCGCCCGGGGGTTGGGCATACCAGCAGTGGGCGGCGGGGGTGCATCTATACTGCTGTTGGTTAGTGTTACGCCGCTGTTGCTCGATGGCCAGCGTGGTGTGGATAGCGTCGCACCGCCAGCGGATg                            <  7:228436/145‑1 (MQ=255)
                                                                                                                       ccACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAg                          <  3:314257/149‑1 (MQ=255)
                                                                                                                          cGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTg                       <  5:112040/149‑1 (MQ=255)
                                                                                                                           ggCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGc                      <  2:304334/149‑1 (MQ=255)
                                                                                                                               cacaGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCg                  >  1:159935/1‑149 (MQ=255)
                                                                                                                                acaGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCACCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCgg                 <  1:253300/149‑1 (MQ=255)
                                                                                                                                 caGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCggg                <  5:82225/149‑1 (MQ=255)
                                                                                                                                  aGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGgc               <  5:338298/149‑1 (MQ=255)
                                                                                                                                    tGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGgcgc             >  6:99454/1‑149 (MQ=255)
                                                                                                                                         tcgtcgCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGGCGCTGGcc        >  4:75590/1‑149 (MQ=255)
                                                                                                                                           gtcgCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGGCGCTGGCCGa      <  4:24816/149‑1 (MQ=255)
                                                                                                                                                ccGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGc                                 >  5:49016/1‑117 (MQ=255)
                                                                                                                                                ccGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGc                                 <  6:49016/117‑1 (MQ=255)
                                                                                                                                                ccGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGGCGCTGGCCGAGCGt  >  3:331389/1‑148 (MQ=255)
                                                                                                                                                ccGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGGCGCTGGCCGAGCGt  >  5:353992/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
GCAGGCGCAGGTTGAACCCGAGCAACCCTATGTGCTGGTGATGACCGAAGTCGGTCCATCCGATGTCGCCCGCCTGGACCCCAACCGGGTTGCCGGCATTGTCACCGCCCAGGGCGGCGCCACGGCCCACAGTGCCATCGTCGCCCGGGCGTTGGGCATACCAGCAGTGGTCGGCGCGGGTGCATCGATACTGCTGTTGGAGAGTGGTACGCCGCTGCTGCTCGATGGCCAGCGTGGTGTGGTCAGCGTCGCACCGCCAGCGGATGAGCTGCAGCGGGCGCTGGCCGAGCGT  >  NC_002947/911094‑911385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.