New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1499507 =	28 (0.490)	12 (0.230)	9/236	NT	21.7%	intergenic (+84/‑80)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 6060505	61 (1.190)					intergenic (+141/+40)	PP_5311/PP_5312	signal transduction protein/hypothetical protein

CGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAAC  >  NC_002947/6060357‑6060653                                                                                                                                                      |                                                                                                                                                      cGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGc                                                                                                                                                       <  3:147934/149‑1 (MQ=255)   cattaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCcc                                                                                                                                                     <  4:321511‑M2/149‑3 (MQ=255)       aagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCccgct                                                                                                                                                  >  8:186440‑M2/1‑143 (MQ=255)        agcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCccgctcc                                                                                                                                                <  8:21064‑M2/149‑8 (MQ=255)            ttaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCccgctccca                                                                                                                                              <  5:330388‑M2/147‑10 (MQ=255)               acacATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGt                                                                                                                                        <  8:286531/149‑1 (MQ=255)                     aGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCg                                                                                                                                  >  2:89077/1‑149 (MQ=255)                              gAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCAGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATcc                                                                                                                         >  1:29990/1‑149 (MQ=255)                                           gCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTTCCCGCGAACACCGGCGAAGCCCGTGCCATTCACCGCGTCGCTTGT‑TTAGCCGGCACGCCCCCTCCCAC‑AGGTAAAGCGTCATCAAACCCCTCGGGcgt                                                                                                              >  1:357038/1‑145 (MQ=25)                                            cTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAg                                                                                                           >  7:177054/1‑149 (MQ=255)                                            cTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAg                                                                                                           >  4:238617/1‑149 (MQ=255)                                             tCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAAAAACGGCGAAGCCGGTTCCATGAACCGCTTCGATTGT‑TTCGCGTGCACCCACCCTCACAA‑CGGTAAAGCGTCAAAATACCAGTAGGTCTTCAGc                                                                                                          >  3:230621/1‑149 (MQ=21)                                               aaTTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCt                                                                                                        >  6:196439/1‑149 (MQ=255)                                                   tCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTttc                                                                                                     <  3:321511/148‑1 (MQ=255)                                                       aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt                                                                                                <  1:10507/149‑1 (MQ=255)                                                       aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt                                                                                                <  5:242484/149‑1 (MQ=255)                                                        cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt                                                                                               <  7:277270/149‑1 (MQ=255)                                                              gcgcGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCACTAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGttt                                                                                          <  1:89077/149‑1 (MQ=255)                                                                gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCat                                                                                       >  6:339518/1‑148 (MQ=255)                                                                gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                       <  7:150582/149‑1 (MQ=255)                                                                gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                       <  7:21064/149‑1 (MQ=255)                                                                     tttGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTAtt                                                                                  >  1:201115/1‑149 (MQ=255)                                                                         gACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcat                                                                              <  6:330388/149‑1 (MQ=255)                                                                         gACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtca                                                                               <  5:82847/148‑1 (MQ=255)                                                                          aCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcatc                                                                             <  7:283794/149‑1 (MQ=255)                                                                              tgGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAcc                                                                         >  6:208361/1‑149 (MQ=255)                                                                               gggAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAccc                                                                        >  4:8226/1‑149 (MQ=255)                                                                               gggAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAccc                                                                        >  6:335701/1‑149 (MQ=255)                                                                                   gCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTgg                                                                    <  5:335701/149‑1 (MQ=255)                                                                                    cGGGATTGCCCGCGAACACCGGCGAAGCCGTTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCACTTGa                                                                   <  5:252434/149‑1 (MQ=255)                                                                                       gCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAAc                                                                 >  7:183157/1‑148 (MQ=255)                                                                                        cTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACca                                                               <  2:201115/149‑1 (MQ=255)                                                                                         ttGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACca                                                               >  7:113672/1‑148 (MQ=255)                                                                                           gCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACcac                                                              <  5:196439/147‑1 (MQ=255)                                                                                           gCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactccct                                                             <  2:7794‑M2/149‑91 (MQ=255)                                                                                             ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa                                                                                        >  1:215228/1‑119 (MQ=255)                                                                                             ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa                                                                                        <  2:215228/119‑1 (MQ=255)                                                                                             ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCa                                                          >  6:22303/1‑149 (MQ=255)                                                                                             ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCa                                                          >  2:17435/1‑149 (MQ=255)                                                                                             ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactccct                                                             <  8:62145‑M2/147‑91 (MQ=255)                                                                                               gcgAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttag                                                          <  2:313147‑M2/148‑94 (MQ=255)                                                                                               gcgAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgcgcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaccgagtcatgcctcccttag                                                          <  7:134631‑M2/148‑94 (MQ=255)                                                                                                   acacCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAgcg                                                    <  3:8226/149‑1 (MQ=255)                                                                                                      ccGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctat                                                  >  1:313147‑M2/1‑48 (MQ=255)                                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCgg                                                >  7:187234/1‑149 (MQ=255)                                                                                                           aaagCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagc                                             >  7:62145‑M2/2‑43 (MQ=255)                                                                                                           aaagCCGGTGCCATGCACCGCGGCGCCGGTGTTCGCGGGCACGCccgctcccacagaatgattgccattaagcgggcctatcgctacagtgacggcccgatttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaag                                              <  5:122976‑M2/148‑106 (MQ=255)                                                                                                             aGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGcc                                          <  8:187234/149‑1 (MQ=255)                                                                                                              gCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGccc                                         >  8:329275/1‑149 (MQ=255)                                                                                                              gCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGccc                                         <  7:329275/149‑1 (MQ=255)                                                                                                                 ggTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTg                                      <  1:17435/149‑1 (MQ=255)                                                                                                                     ccATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACAt                                                            <  1:50115/123‑1 (MQ=255)                                                                                                                     ccATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACAt                                                            >  2:50115/1‑123 (MQ=255)                                                                                                                     ccATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCt                                  <  2:206796/149‑1 (MQ=255)                                                                                                                     ccATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCt                                  <  2:29990/149‑1 (MQ=255)                                                                                                                      cATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACAAGCGCCGGGTTGCCCTTGATcag                                 >  5:22808/1‑147 (MQ=255)                                                                                                                       aTGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCCC‑AGGTAAAGCGTCATAATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAAACACATCACCCGAGCCGGGTTGCCCTTGATCTg                                 >  2:191488/1‑148 (MQ=255)                                                                                                                       aTGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTgg                                <  7:136837/149‑1 (MQ=255)                                                                                                                       aTGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTg                                 >  6:86757/1‑148 (MQ=255)                                                                                                                        tGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGa                               >  7:88164/1‑149 (MQ=255)                                                                                                                        tGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGa                               <  3:238617/149‑1 (MQ=255)                                                                                                                        tGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGa                               <  8:177054/149‑1 (MQ=255)                                                                                                                             cgcgTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTc                                                                                         >  8:153994/1‑86 (MQ=255)                                                                                                                             cgcgTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTc                                                                                         <  7:153994/86‑1 (MQ=255)                                                                                                                               cgTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCtt                        >  1:244370/1‑149 (MQ=255)                                                                                                                                   gCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTcc                    >  3:133295/1‑149 (MQ=255)                                                                                                                                   gCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTc                     <  5:208361/148‑1 (MQ=255)                                                                                                                                   gCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTc                     <  5:234198/148‑1 (MQ=255)                                                                                                                                    cTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCtt                        >  7:120767/1‑144 (MQ=255)                                                                                                                                    cTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCtt                        <  8:120767/144‑1 (MQ=255)                                                                                                                                      ggtgttcgcgGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttcc                   >  5:343045‑M2/5‑17 (MQ=255)                                                                                                                                      ggtgttcgcgGGCACGCccgcgcccacagcctgattgcccttaagccggccgatcgcgacagtgccggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgcgatcaagcagatctgaaacgtcccgacttcttcc                   >  2:307600‑M2/5‑17 (MQ=255)                                                                                                                                            cgcgGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagagcgctatcaagcagatctgaaacgtcccgacttcttccatgac              >  1:7794‑M2/1‑11 (MQ=255)                                                                                                                                            cgcgGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttccatgacg             <  6:220520‑M2/149‑139 (MQ=255)                                                                                                                                             gcgGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATccc            <  5:245560/148‑1 (MQ=255)                                                                                                                                              cgGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCtt          <  5:22303/149‑1 (MQ=255)                                                                                                                                              cgGGCACGCCCGCTACCAG‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCtt          <  4:230621/149‑1 (MQ=255)                                                                                                                                                ggCACGCCCGCGCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGc        <  8:65890/149‑1 (MQ=255)                                                                                                                                                 gCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttccatgacgcggcg        <  5:40953‑M2/149‑144 (MQ=255)                                                                                                                                                  cACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagcagatctgaaacgtcccgacttcttccatgacgcggcgc       >  6:40953‑M2/1‑5 (MQ=255)                                                                                                                                                  cACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctat                                                  <  7:317298‑M2/106‑102 (MQ=255)                                                                                                                                                  cACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctat                                                  >  8:317298‑M2/1‑5 (MQ=255)                                                                                                                                                     gCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGaa   >  2:103604/1‑149 (MQ=255)                                                                                                                                                     gCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGaa   >  8:250141/1‑149 (MQ=255)                                                                                                                                                      cccGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATGTGGATGTGCTTGTCCTGAATCCCTTGCATGAAc  <  1:191488/149‑1 (MQ=255)                                                                                                                                                      cccGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAAc  <  2:357038/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      CGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAAC  >  NC_002947/6060357‑6060653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.