New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2130390 =	57 (1.010)	3 (0.060)	3/250	NT	5.6%	coding (1809/2496 nt)	fimD	type I pili subunit FimD
	?	NC_002947	2130432 =	47 (0.860)					coding (1767/2496 nt)	fimD	type I pili subunit FimD

GCTTCGGTATAGCCAGCACTCACGCTGGCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAGGTTGTAGC  >  NC_002947/2130283‑2130574                                                                                                                                                        |                                                                                                                                               gCTTCGGTATAGCCAGCACTCACGCTGGCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTCTCGGCTGGTGCTGTAGCTCA‑‑‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACgctgg                                                                                                                                                <  1:98605/149‑1 (MQ=255)   ttacggcaatgagcgtctgtttggcctgtgcggtacggtaccattgcatttcggtcaccgcgccaatgcgaccttcgaccttcagcacaacgccaacggctacagcCAGC‑GCGCGGGCGCTGTCGCTGCCGCTGAGCGTGGCACgctgg                                                                                                                                                >  5:344757‑M1/107‑149 (MQ=255)   ttCGGTATAGCCAGCACTCACGCTGGCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACgctggc                                                                                                                                               <  8:323665/149‑1 (MQ=255)       gTATAGCCAGCACTCACGCTGGCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACgctggctg                                                                                                                                             >  1:342297/1‑147 (MQ=255)       gTATAGCCAGCACTCACGCTGGCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACgctggctg                                                                                                                                             >  3:20600/1‑147 (MQ=255)             ccAGCACTCAGGCTGGCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGtt                                                                                                                                     >  8:311099/1‑149 (MQ=255)               aGCACTCACGCTGGCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTgg                                                                                                                                   >  4:326636/1‑149 (MQ=255)                      aCGCTGGCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTtgtg                                                                                                                            <  4:226369/149‑1 (MQ=255)                            gCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGtgctgc                                                                                                                        <  5:314194/147‑1 (MQ=255)                            gCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGtgctgc                                                                                                                        <  6:126766/147‑1 (MQ=255)                            gCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAg                                                                                                                      >  7:246901/1‑149 (MQ=255)                            gCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGGGCTGTAGCTCATCGGCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGtgctg                                                                                                                         <  1:107220/147‑1 (MQ=255)                                aGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTc                                                                                                                   >  1:218859/1‑148 (MQ=255)                                  ggggCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACgctgg                                                                                                                                                >  6:337885/1‑117 (MQ=255)                                  ggggCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACgctgg                                                                                                                                                <  5:337885/117‑1 (MQ=255)                                    ggCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑TCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAgg                                                                                                              <  4:342178/149‑1 (MQ=255)                                     gCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGAGTGGCACACTTGCTGTAGCAGTTGGAGTTGTTCTGCAGGTCGaatct                                                                                                             >  8:146752/1‑146 (MQ=255)                                      ccTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTc                                                                                                            >  5:286782/1‑149 (MQ=255)                                         gATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGtgct                                                                                                                          <  2:253748/132‑1 (MQ=255)                                         gATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACCGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGtgct                                                                                                                          >  1:253748/1‑132 (MQ=255)                                             gCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTgg                                                                                                     <  3:265683/149‑1 (MQ=255)                                                   tttcggtcaccgcgccaatgcgaccttcgacctgcagcacaacgccaacggctacagcCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACgctggc                                                                                                                                               >  7:90359‑M1/59‑102 (MQ=255)                                                   tttcggtcaccgcgccaatgcgaccttcgacctgcagcacaacgccaacggctacagcCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACgctggc                                                                                                                                               <  8:90359‑M1/44‑1 (MQ=255)                                                     aCAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGgc                                                                                                    >  3:238902/1‑142 (MQ=255)                                                     aCAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGgc                                                                                                    <  4:238902/142‑1 (MQ=255)                                                      cAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGAc                                                                                            <  3:326636/149‑1 (MQ=255)                                                      cAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGAc                                                                                            <  6:286782/149‑1 (MQ=255)                                                         tGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCA‑‑‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGaaa                                                                                       >  6:125578/1‑149 (MQ=255)                                                           ccGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCA‑‑‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAAt                                                                                      <  5:125578/148‑1 (MQ=255)                                                                     gCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAgg                                                                                <  1:13213/146‑1 (MQ=255)                                                                     gCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGt                                                                              <  2:218859/148‑1 (MQ=255)                                                                              ttCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGc                                                                    >  1:324163/1‑149 (MQ=255)                                                                              ttCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGc                                                                    >  8:201230/1‑149 (MQ=255)                                                                                 gTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGca                                                                   >  3:145168/1‑146 (MQ=255)                                                                                 gTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCt                                                                   >  7:257120/1‑147 (MQ=255)                                                                                  tCAGGGCTC‑AGGCTGTTGCTGTAGCTCAGC‑GCGCGGGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGAGCGAATTGCAAGGGTACCGTCACGCTCAg                                                                <  4:145168/149‑1 (MQ=255)                                                                                  tCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAg                                                                >  2:21635/1‑149 (MQ=255)                                                                                             ggCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGa                                                      >  7:340438/1‑149 (MQ=255)                                                                                             ggCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGa                                                      <  2:342297/149‑1 (MQ=255)                                                                                              gCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGAc                                                     <  8:246901/149‑1 (MQ=255)                                                                                              gCTGGGGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGa                                                      <  4:20600/148‑1 (MQ=255)                                                                                                  gTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACAGACGAt                                                  >  5:160962/1‑148 (MQ=255)                                                                                                   tGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCa                                                <  8:257120/149‑1 (MQ=255)                                                                                                    gCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCAt                                               >  4:279967/1‑149 (MQ=255)                                                                                                       gTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGc                                            >  4:101379/1‑149 (MQ=255)                                                                                                         aGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGcc                                           <  2:184383/148‑1 (MQ=255)                                                                                                          gCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCg                                          >  7:307121/1‑148 (MQ=255)                                                                                                            gccagcgtgccacgctcagcggcagcgacagcgcgcgcgcgctgGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGaaa                                                                                       <  8:90359‑M2/58‑1 (MQ=255)                                                                                                            gccagcgtgccacgctcagcggcagcgacagcgcgcgcgcgctgGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGaaa                                                                                       >  7:90359‑M2/45‑102 (MQ=255)                                                                                                             ccagcgtgccacgctcagcggcagcgacagcgcccgcgcgctgGCTGTAGCCGTTGGCGTTGTGCTGAAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAATGGTACCGTACCGCACAGGCCAAACAGACGCTCATTGCCGTaa                                       >  5:344757‑M2/44‑149 (MQ=255)                                                                                                             CAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAAc                                      >  4:10573‑M1/1‑149 (MQ=255)                                                                                                                        gcgcTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCg                                          >  8:145121/1‑135 (MQ=255)                                                                                                                        gcgcTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCg                                          <  7:145121/135‑1 (MQ=255)                                                                                                                        gcgcTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAAcggtcg                                 >  7:145277/1‑144 (MQ=255)                                                                                                                        gcgcTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAAcggtcg                                 <  8:145277/144‑1 (MQ=255)                                                                                                                            tGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGATCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGAt                        >  2:220156/1‑149 (MQ=255)                                                                                                                                         gAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGaa             >  6:321559/1‑147 (MQ=255)                                                                                                                                          aGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACa           <  3:101379/148‑1 (MQ=255)                                                                                                                                           gCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAgg         >  8:244872/1‑149 (MQ=255)                                                                                                                                            cGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAGGt        <  7:244872/149‑1 (MQ=255)                                                                                                                                                gCACTCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTTCCGTGACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAGGTTGTa    <  7:311099/149‑1 (MQ=255)                                                                                                                                                gCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAGGTTGt     <  2:324163/148‑1 (MQ=255)                                                                                                                                                gCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCCGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAGGTTGTa    <  1:21635/149‑1 (MQ=255)                                                                                                                                                 cACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAGGTTGTAg   <  7:201230/149‑1 (MQ=255)                                                                                                                                                  aCGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAGGTTGTAGc  <  8:340438/149‑1 (MQ=255)                                                                                                                                                     ctgGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAGGt        <  7:3298‑M2/137‑1 (MQ=255)                                                                                                                                                     ctgGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAGGt        >  8:3298‑M2/4‑140 (MQ=255)                                                                                                                                                        |                                                                                                                                               GCTTCGGTATAGCCAGCACTCACGCTGGCATAGGGGGCCTGATGGCCGAGCGACAGTGCCGCTGTCTTGCGGGCGTGTTCGTCACGGCTC‑AGGCTGGTGCTGTAGCTCAGC‑GCGCGCGCGCTGTCGCTGCCGCTGAGCGTGGCACGCTGGCTGTAGCCGTTGGCGTTGTGCTGCAGGTCGAAGGTCGCATTGGCGCGGTGACCGAAATGCAAGGGTACCGTCACGCTCAGGCCAAACTGACGATCATTGCCGTAACGGTCGGTCAACGATTGTGAGGCGAACAGGTTGTAGC  >  NC_002947/2130283‑2130574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.