New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2453996 =86 (1.520)5 (0.090) 5/248 NT 5.6% coding (1123/3450 nt) mfd transcription‑repair coupling factor
?NC_002947 2454041 = 88 (1.630)coding (1078/3450 nt) mfd transcription‑repair coupling factor

Only 100 of 117 total aligned reads displayed.

CGGGCGCAGCTTCAGCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCCGGCGGCAACAGCGGCC  >  NC_002947/2453895‑2454187
                                                                                                                                                  |                                                                                                                                                  
cGGGCGCAGCTTCAGCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCACCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGt                                                                                                                                                  <  3:265457/149‑1 (MQ=255)
 gggCGCAGCTTCAGCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGtt                                                                                                                                                 >  8:54967/1‑149 (MQ=255)
     gcAGCTTCAGCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTggg                                                                                                                                              >  6:54755/1‑148 (MQ=255)
       aggtgcAGGCGTTCGTGCAGTTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCAGTGGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTGGATGGCCAGGTTGGGCa                                                                                                                                            <  2:133175/143‑1 (MQ=255)
        gCTTCAGCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAgg                                                                                                                                          <  3:74144/149‑1 (MQ=255)
         cTTCAGCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAggg                                                                                                                                         <  5:355397/149‑1 (MQ=255)
          ttCAGCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGgc                                                                                                                                        >  1:84820/1‑149 (MQ=255)
           tCAGCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGgcg                                                                                                                                       >  3:232893/1‑149 (MQ=255)
           tCAGCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGgcg                                                                                                                                       >  7:15133/1‑149 (MQ=255)
              gCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTg                                                                                                                                                >  2:317242/1‑137 (MQ=255)
              agcagtggccccgggtggtggtcagcagcgaagagctggagcctggcgtgggccgcgagcgcttcccggcgcgcgccctgcccaaccTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAg                                                                                                                                                    >  6:15243‑M1/88‑133 (MQ=255)
              agcagtggccccgggtggtggtcagcagcgaagagctggagcctggcgtgggccgcgagcgcttcccggcgcgcgccctgcccaaccTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAg                                                                                                                                                    <  5:15243‑M1/46‑1 (MQ=255)
               ccGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGgcgcgcg                                                                                                                                   >  3:359786/1‑149 (MQ=255)
                cGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGgcgcgcgc                                                                                                                                  <  3:60408/149‑1 (MQ=255)
                 gTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGcc                                                                                                                                 >  8:70031/1‑149 (MQ=255)
                  ttCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCg                                                                                                                                <  7:70031/149‑1 (MQ=255)
                  ttCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCg                                                                                                                                <  2:34818/149‑1 (MQ=255)
                     gAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGt                                                                                                                                                  <  4:244354/128‑1 (MQ=255)
                     gAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGt                                                                                                                                                  >  3:244354/1‑128 (MQ=255)
                       gcagcTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGgcgcgc                                                                                                                                    <  3:79301/140‑1 (MQ=255)
                       gcagcTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGgcgcgc                                                                                                                                    >  4:79301/1‑140 (MQ=255)
                          gcTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAgcgc                                                                                                                        <  2:84820/149‑1 (MQ=255)
                           cTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCt                                                                                                                       >  5:163917/1‑149 (MQ=255)
                            tCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTc                                                                                                                      >  6:178803/1‑149 (MQ=255)
                               agcagcACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTcgcg                                                                                                                   >  6:39964/1‑149 (MQ=255)
                                gcagcaCTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCgg                                                                                                                  <  8:176609/149‑1 (MQ=255)
                                 cagcaCTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAgcgc                                                                                                                        <  3:178354/142‑1 (MQ=255)
                                 cagcaCTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAgcgc                                                                                                                        >  4:178354/1‑142 (MQ=255)
                                 cagcaCTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGc                                                                                                                 <  8:34746/149‑1 (MQ=255)
                                  agcaCTTCCCGGCGGCCCGCTGATTCGGCAGTCAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGcc                                                                                                                <  1:236407/149‑1 (MQ=255)
                                    caCTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCa                                                                                                              >  8:284146/1‑149 (MQ=255)
                                      cTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGTGGCCCACg                                                                                                            >  1:323302/1‑149 (MQ=255)
                                         cccGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGc                                                                                                           <  4:344013/147‑1 (MQ=255)
                                            ggcggcCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCGTCGATGGCCAGGTTGGGCAGGGAGCGCGCCGGGAAGCGCTc                                                                                                                      >  5:124938/1‑133 (MQ=255)
                                                gcCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGTGGCCCACGCCAGGCTCCa                                                                                                  <  2:323302/149‑1 (MQ=255)
                                                  ccGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAgg                                                                                                                                          >  7:237711/1‑107 (MQ=255)
                                                  ccGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAgg                                                                                                                                          <  8:237711/107‑1 (MQ=255)
                                                  ccGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGc                                                                                                >  4:306171/1‑149 (MQ=255)
                                                     cTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCGAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGctct                                                                                             <  4:348778/149‑1 (MQ=255)
                                                     cTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGctct                                                                                             <  4:232893/149‑1 (MQ=255)
                                                        aTTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCg                                                                                          <  6:163917/149‑1 (MQ=255)
                                                        aTTCGGCAGTGAAGACCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCtt                                                                                            <  1:357248/147‑1 (MQ=255)
                                                           cGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTc                                                                                                    <  8:62806/136‑1 (MQ=255)
                                                           cGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTc                                                                                                    >  7:62806/1‑136 (MQ=255)
                                                           cGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCgctg                                                                                       <  4:359786/149‑1 (MQ=255)
                                                            ggCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCgctg                                                                                       <  2:47084/148‑1 (MQ=255)
                                                                 tGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGGGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGac                                                                                  >  5:315199/1‑148 (MQ=255)
                                                                      agCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGaccaccac                                                                            <  6:315199/149‑1 (MQ=255)
                                                                          cgcgGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCgg                                                                        >  3:149058/1‑149 (MQ=255)
                                                                            cgGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCgggg                                                                      >  4:267476/1‑149 (MQ=255)
                                                                             ggCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGc                                                                     <  1:71323/149‑1 (MQ=255)
                                                                                     aaCTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCtt                                                             >  2:210189/1‑149 (MQ=255)
                                                                                            cGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCgg                                                      <  1:232242/149‑1 (MQ=255)
                                                                                            cGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCgg                                                      <  5:289836/149‑1 (MQ=255)
                                                                                             gAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGCGCCgg                                                      >  6:289836/1‑148 (MQ=255)
                                                                                              aGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGc                                                    <  5:54755/149‑1 (MQ=255)
                                                                                               ggAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGc                                                    >  3:8943/1‑148 (MQ=255)
                                                                                                gAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGaa                                                                                                                            <  5:318284/75‑1 (MQ=255)
                                                                                                gAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGaa                                                                                                                            >  6:318284/1‑75 (MQ=255)
                                                                                                gAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGa                                                  <  3:267476/149‑1 (MQ=255)
                                                                                                 aaGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGaa                                                 <  7:284146/149‑1 (MQ=255)
                                                                                                   gTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAg                                                >  1:332294/1‑148 (MQ=255)
                                                                                                   gTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAg                                                >  1:317495/1‑148 (MQ=255)
                                                                                                    ctggccatcgaggccaaggccaaccagccgctggccgagctggccaGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCt                                                              <  5:15243‑M2/87‑1 (MQ=255)
                                                                                                    ctggccatcgaggccaaggccaaccagccgctggccgagctggccaGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCt                                                              >  6:15243‑M2/47‑133 (MQ=255)
                                                                                                     TGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCaa                                             <  7:79496‑M1/149‑1 (MQ=255)
                                                                                                      ggccatcgaggccaaggccaaccagccgctggccgagctggccaGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCCCTGCTTGAGCCGGGcgaagagat                                            >  7:71067‑M2/45‑145 (MQ=255)
                                                                                                      ggccatcgaggccaaggccaaccagccgctggccgagctggccaGGTTGGGCAGGGCGCGCGCCGGGAAGCGCGCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGaa                                                 <  8:71067‑M2/100‑1 (MQ=255)
                                                                                                        CCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCt                                          <  5:105851‑M1/149‑1 (MQ=255)
                                                                                                         CAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCtt                                         <  2:281240‑M1/149‑1 (MQ=255)
                                                                                                           gCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTc                                        >  3:18016/1‑148 (MQ=255)
                                                                                                            cTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCa                                      <  7:48709/149‑1 (MQ=255)
                                                                                                                 ccAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCgg                                  >  3:195466/1‑148 (MQ=255)
                                                                                                                 ccAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCgg                                  >  4:156268/1‑148 (MQ=255)
                                                                                                                   aGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCgg                                  >  8:230154/1‑146 (MQ=255)
                                                                                                                   aGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCa                                <  7:230154/148‑1 (MQ=255)
                                                                                                                    gCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAg                               >  1:167813/1‑148 (MQ=255)
                                                                                                                      ggCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGaa                            <  4:195466/149‑1 (MQ=255)
                                                                                                                       gCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGaa                            >  8:262562/1‑148 (MQ=255)
                                                                                                                       gCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGaa                            >  3:190609/1‑148 (MQ=255)
                                                                                                                        cTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACa                          <  6:105851/149‑1 (MQ=255)
                                                                                                                             tggccttggcctCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTcg                     >  8:71907/1‑149 (MQ=255)
                                                                                                                              ggccttggcctCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTcgg                    >  6:362141/1‑149 (MQ=255)
                                                                                                                                     gcctCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACa                          >  1:17533/1‑136 (MQ=255)
                                                                                                                                     gcctCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACa                          <  2:17533/136‑1 (MQ=255)
                                                                                                                                      cctCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCcggcgg             >  3:162666/1‑148 (MQ=255)
                                                                                                                                      cctCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCcggcg              >  4:230890/1‑147 (MQ=255)
                                                                                                                                      cctCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCcggcg              <  3:230890/147‑1 (MQ=255)
                                                                                                                                       ctCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCCggcggc            >  6:298089/1‑148 (MQ=255)
                                                                                                                                         cGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCTGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCCGGCGGCAAc         <  7:71907/149‑1 (MQ=255)
                                                                                                                                          gATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCtac                                        >  2:143051/1‑115 (MQ=255)
                                                                                                                                          gATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTc                                        <  1:143051/117‑1 (MQ=255)
                                                                                                                                          gATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCCGGCGGCaa          >  2:197910/1‑147 (MQ=255)
                                                                                                                                          gATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCCGGCGGCAAc         <  4:18016/148‑1 (MQ=255)
                                                                                                                                            tggccaGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCCGGCGGCAACAGc      <  5:39964‑M2/143‑1 (MQ=255)
                                                                                                                                               ccaGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACAGGCAGGAACAGCTCGGCCGGCGGCAACAGCGGc   >  6:79433‑M2/4‑149 (MQ=255)
                                                                                                                                                caGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCCCCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCCGGCGGCAACAGCGGcc  >  6:175947‑M2/3‑149 (MQ=255)
                                                                                                                                                caGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCgg                                  <  2:213064‑M2/115‑1 (MQ=255)
                                                                                                                                                caGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCgg                                  >  1:213064‑M2/3‑117 (MQ=255)
                                                                                                                                                caGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCCGGCGGCAACAGCGGcc  <  2:332294‑M2/147‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CGGGCGCAGCTTCAGCCGTTCGAGCAGCTCCAGCAGCACTTCCCGGCGGCCCGCTGATTCGGCAGTGAAGAGCACGCGGCCGGGGAACTGGTCGAGGAAGTTGGCCAGCTCGGCCAGCGGCTGGTTGGCCTTGGCCTCGATGGCCAGGTTGGGCAGGGCGCGCGCCGGGAAGCGCTCGCGGCCCACGCCAGGCTCCAGCTCTTCGCTGCTGACCACCACCCGGGGCCACTGCTTGAGCCGGGCGAAGCAATCTTCCACCGGCAGGAACAGCTCGGCCGGCGGCAACAGCGGCC  >  NC_002947/2453895‑2454187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.