New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4067421 =52 (0.920)3 (0.050) 3/252 NT 5.7% coding (1643/3108 nt) mdtC multidrug transporter membrane protein
?NC_002947 4067453 = 48 (0.870)coding (1611/3108 nt) mdtC multidrug transporter membrane protein

AAGGCGCGGCGGTAGATTTCCATCTTCGGCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTCGGCCTGTTGCGGCTTGAGC  >  NC_002947/4067307‑4067597
                                                                                                                                                  |                                                                                                                                                
ctgcagcgctggagcgacacgctgcatcagcgcatggttgctgcctatgaccacagcctgggctgggccctgcgccacaagcggctgaccctgctcagcctgctggccaccatcGGCACCACCACGTACAGGGCGATGTTGATGCCGAt                                                                                                                                                <  1:255952‑M1/35‑1 (MQ=255)
 aGGCGCGGCGGTAGATTTCCATCTTAGGCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGAtg                                                                                                                                               <  8:186653/149‑1 (MQ=255)
   cagcgctggagcgacacgctgcatcagcgcatggttgctgcctatgaccacagcctgggctgggccctgcgccacaagcggctgaccctgctcagcctgctggccaccatcGGCACCACCACGTACAGGGCGATGTTGATGCCGAtgg                                                                                                                                              >  7:21898‑M1/112‑148 (MQ=255)
    cgcgGCGGTAGATTTCCATCTTCGGCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGAtggtg                                                                                                                                            <  3:223696/149‑1 (MQ=255)
     gcgctggagcgacacgctgcatcagcgcatggttgctgcctatgaccacagcctgggctgggccctgcgccacaagcggctgaccctgctcagcctgctggccaccatcGGCACCACCACGTACAGGGCGATGTTGATGCCGAtggtgg                                                                                                                                           >  2:255952‑M1/110‑149 (MQ=255)
                     aTCTTCGGCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAg                                                                                                                           <  4:174734/149‑1 (MQ=255)
                      tCTTCGGCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCAATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAgg                                                                                                                          >  7:52395/1‑149 (MQ=255)
                       cTTCGGCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCcagc                                                                                                                                      <  1:296638/136‑1 (MQ=255)
                       cTTCGGCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCcagc                                                                                                                                      >  2:296638/1‑136 (MQ=255)
                        ttCGGCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGAtggtg                                                                                                                                            <  8:305099/129‑1 (MQ=255)
                        ttCGGCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGAtggtg                                                                                                                                            >  7:305099/1‑129 (MQ=255)
                        ttCGGCTGCATCACCGTGAACGACAGGCCATCGTCAACCCGGATGAAGCCCATCAAATGGCCGGTATCCTGCTTGGGCATCAGCGTCTTGGGAACCACAACGTACAGGGCGATGTTGATGCCGATGTTGGACAGCAGGCTGAGCAgtg                                                                                                                         >  3:227539/1‑146 (MQ=255)
                            gCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAgg                                                                                                                          >  1:217607/1‑143 (MQ=255)
                            gCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAgg                                                                                                                          <  2:217607/143‑1 (MQ=255)
                                 aTCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCtt                                                                                                               <  1:95684/149‑1 (MQ=255)
                                  tCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTtg                                                                                                              >  3:99955/1‑149 (MQ=255)
                                  tCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTtg                                                                                                              <  2:62592/149‑1 (MQ=255)
                                   cACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTtgt                                                                                                             >  4:157341/1‑149 (MQ=255)
                                     ccGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTgg                                                                                                           >  8:98191/1‑149 (MQ=255)
                                       gTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGgcg                                                                                                         >  1:141714/1‑149 (MQ=255)
                                             gACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTtgtg                                                                                                            >  2:59496/1‑140 (MQ=255)
                                             gACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTtgtg                                                                                                            <  1:59496/140‑1 (MQ=255)
                                                  gCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGgcccagc                                                                                              >  6:93374/1‑149 (MQ=255)
                                                  gCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGgcccagc                                                                                              >  8:301593/1‑149 (MQ=255)
                                                        gtcACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAgg                                                                                         <  4:99955/148‑1 (MQ=255)
                                                           aCCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCtgt                                                                                     <  8:52395/149‑1 (MQ=255)
                                                            ccccGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCtgtg                                                                                    <  7:98191/149‑1 (MQ=255)
                                                              ccGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGGGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGt                                                                                  >  7:96523/1‑149 (MQ=255)
                                                                      aGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAgg                                                                            >  1:189363/1‑147 (MQ=255)
                                                                              aaCTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCAt                                                                  <  7:22229/149‑1 (MQ=255)
                                                                                 tGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATgcg                                                               >  4:227375/1‑149 (MQ=255)
                                                                                     cGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGa                                                           <  4:316364/149‑1 (MQ=255)
                                                                                      ggTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGAt                                                          >  8:21542/1‑149 (MQ=255)
                                                                                        tATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGc                                                        <  3:157341/149‑1 (MQ=255)
                                                                                          tCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGGGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAg                                                      <  8:96523/149‑1 (MQ=255)
                                                                                           ccTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCGTGTGGCGCAGGGCCCCGCCCAGGCGGTGGGCagag                                                                             >  5:363088/1‑125 (MQ=255)
                                                                                            ctgctgGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGc                                                     <  7:301593/148‑1 (MQ=255)
                                                                                            ctgctgGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCg                                                    >  3:30824/1‑149 (MQ=255)
                                                                                              gctgGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCgtg                                                  >  2:245093/1‑149 (MQ=255)
                                                                                               ctgGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCgtg                                                  <  2:189363/148‑1 (MQ=255)
                                                                                               ctgGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCACGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCgtgt                                                 >  5:313906/1‑149 (MQ=255)
                                                                                                 ggggCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGGTGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCg                                               >  2:127246/1‑149 (MQ=255)
                                                                                                      aTCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGACGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCa                                          >  8:12073/1‑149 (MQ=255)
                                                                                                       tCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAg                                         >  1:360914/1‑149 (MQ=255)
                                                                                                          gCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAgcac                                      >  3:358781/1‑147 (MQ=255)
                                                                                                          ccaccatcggcatcaacatcgccctgtacgtggtggtgccGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAgcgc                                      >  2:255952‑M2/41‑149 (MQ=255)
                                                                                                             ccatcggcatcaacatcgccctgtacgtggtggtgccGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTg                                    >  7:21898‑M2/38‑148 (MQ=255)
                                                                                                              cTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTg                                    >  2:94087/1‑147 (MQ=255)
                                                                                                               ttGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAg                                 >  3:222582/1‑149 (MQ=255)
                                                                                                               atcggcatcaacatcgccctgtacgtggtggtgccGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAg                                 <  1:255952‑M2/114‑1 (MQ=255)
                                                                                                                tGGGCACCACCACGTACAGGGCGATGTTGGTGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAgg                                <  1:127246/149‑1 (MQ=255)
                                                                                                                 gggCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCa                                  <  6:313906/146‑1 (MQ=255)
                                                                                                                           acGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTc                     <  4:222582/149‑1 (MQ=255)
                                                                                                                                   ggCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTCGGc                  <  7:194291/144‑1 (MQ=255)
                                                                                                                                   ggCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTCGGc                  >  8:194291/1‑144 (MQ=255)
                                                                                                                                           tGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTCGGCCTGTTGCGGCtt      >  4:125827/1‑148 (MQ=255)
                                                                                                                                              tgccGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTCGGCCTGTTGCGGCTTGAGc  <  7:21542‑M2/145‑1 (MQ=255)
                                                                                                                                               gccGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTCGGc                  <  7:315580‑M2/129‑1 (MQ=255)
                                                                                                                                               gccGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTCGGc                  >  8:315580‑M2/4‑132 (MQ=255)
                                                                                                                                                ccGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTCGGCCTGTTGCGGCTTGa    >  4:139978‑M2/3‑145 (MQ=255)
                                                                                                                                                ccGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTCGGCCTGTTGCGGCTTGa    <  3:139978‑M2/143‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
AAGGCGCGGCGGTAGATTTCCATCTTCGGCTGCATCACCGTGAACGACAGGCCGTCGTCACCCCGGATGAAGCCCATCAACTGGCCGGTATCCTGCTGGGGCATCAGCGTCTTGGGCACCACCACGTACAGGGCGATGTTGATGCCGATGGTGGCCAGCAGGCTGAGCAGGGTCAGCCGCTTGTGGCGCAGGGCCCAGCCCAGGCTGTGGTCATAGGCAGCAACCATGCGCTGATGCAGCGTGTCGCTCCAGCGCTGCAGGCGTGTCTGCTCGGCCTGTTGCGGCTTGAGC  >  NC_002947/4067307‑4067597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.