New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5539106	52 (0.920)	3 (0.060)	3/248	NT	5.6%	coding (1880/2355 nt)	PP_4872	hypothetical protein
	?	NC_002947	= 5539144	51 (0.940)					coding (1842/2355 nt)	PP_4872	hypothetical protein

GTAGCGCAAGAACGCCTTGTGCAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTCGAGAACTTCTCGAACATGC  >  NC_002947/5538997‑5539292                                                                                                                                                     |                                                                                                                                                     gTAGCGCAAGAACGCCTTGTGCAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCt                                                                                                                                                     >  7:191961‑M2/1‑148 (MQ=255)       cAAGAACGCCTAGTGCAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCt                                                                                                                                               >  8:248860/1‑149 (MQ=255)          gAACGCCTTGTGCAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGt                                                                                                                                            >  7:259568/1‑149 (MQ=255)                cTTGTGCAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCt                                                                                                                                                     <  7:202288‑M2/134‑2 (MQ=255)                cTTGTGCAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCt                                                                                                                                                     >  8:202288‑M2/1‑133 (MQ=255)                    tgCAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGaa                                                                                                                                  <  4:129384/149‑1 (MQ=255)                     gCAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAg                                                                                                                                 >  6:182406/1‑149 (MQ=255)                      cAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAg                                                                                                                                 <  3:332977/148‑1 (MQ=255)                      cAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAg                                                                                                                                 <  2:20105/148‑1 (MQ=255)                                  cTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCa                                                                                                                    <  7:59010/149‑1 (MQ=255)                                  cTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCa                                                                                                                    <  8:259568/149‑1 (MQ=255)                                   tcgtcgCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTgg                                                                                                                                             >  4:101587/1‑123 (MQ=255)                                   tcgtcgCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTgg                                                                                                                                             <  3:101587/123‑1 (MQ=255)                                   tcgtcgCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAg                                                                                                                   >  1:333934/1‑149 (MQ=255)                                                     tcCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTtcat                                                                                                 >  6:174506/1‑149 (MQ=255)                                                       cACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTtcatc                                                                                                <  4:231454/148‑1 (MQ=255)                                                       cACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTtcatc                                                                                                >  4:340992/1‑148 (MQ=255)                                                       cACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTtca                                                                                                  <  4:207606/146‑1 (MQ=255)                                                       cACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTtc                                                                                                   <  2:120133/145‑1 (MQ=255)                                                        aCCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTcatcat                                                                                              >  3:222180/1‑149 (MQ=255)                                                          cccTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGt                                                                                            <  4:222180/149‑1 (MQ=255)                                                            cTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCt                                                                                          >  7:261858/1‑149 (MQ=255)                                                                gCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTtcgt                                                                                      >  3:285156/1‑149 (MQ=255)                                                                      gTAGGTCACCTTGCGCAGCGGGTTCTTGCCTTAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCggtg                                                                                 <  3:340992/148‑1 (MQ=255)                                                                      gTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCggt                                                                                  <  2:333934/147‑1 (MQ=255)                                                                          gTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGcgcg                                                                                                                                     <  6:101719/92‑1 (MQ=255)                                                                          gTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGcgcg                                                                                                                                     >  5:101719/1‑92 (MQ=255)                                                                          gTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTAcc                                                                            >  4:272670/1‑149 (MQ=255)                                                                           tCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCGTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCg                                                                           >  2:222404/1‑149 (MQ=255)                                                                           tCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAgg                                                                                                            <  6:317636/116‑1 (MQ=255)                                                                           tCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCGTCGTCGGTGGTAcag                                                                           >  8:327768/1‑147 (MQ=255)                                                                              ccTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCgggg                                                                        >  4:8747/1‑149 (MQ=255)                                                                               cTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGt                                                                       >  6:326733/1‑149 (MQ=255)                                                                                     cAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCgg                                                                 <  8:261858/149‑1 (MQ=255)                                                                                          ggTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAAt                                                             >  5:89323/1‑148 (MQ=255)                                                                                            ttCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATg                                                            >  7:262234/1‑147 (MQ=255)                                                                                                  ccTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACgg                                                    <  6:89323/149‑1 (MQ=255)                                                                                                   cTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCtgtaccactcaggcaagaacccgctgcgcaaggtgacctacaagagcgaaggggtggagatcgtcaagagcgacgagcaacgccgtctgcacaaggcgt                                                   <  1:187001‑M2/149‑100 (MQ=255)                                                                                                    tGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCgg                                                                                   >  2:172597/1‑116 (MQ=255)                                                                                                    tGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCgg                                                                                   <  1:172597/116‑1 (MQ=255)                                                                                                       gTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCa                                               <  5:174506/149‑1 (MQ=255)                                                                                                        tGGTACATGGCCGTGGCCGAGGCCATTGGCGACGGGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGAt                                                 >  1:57901/1‑147 (MQ=255)                                                                                                         ggTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAgg                                             <  4:285156/149‑1 (MQ=255)                                                                                                          gTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCtgtaccactcaggcaagaacccgctgcgcaaggtgacctacaagagcgaaggggtggagatcgtcaag                                                                                  >  6:166989‑M2/1‑43 (MQ=255)                                                                                                          gTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCtgtaccactcaggcaagaacccgctgcgcaaggtgacctacaagagcgaaggggtggagatcgtcaag                                                                                  <  5:166989‑M2/111‑69 (MQ=255)                                                                                                          gTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAgg                                             >  7:109953/1‑148 (MQ=255)                                                                                                           tACATGGCAGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAg                                              <  6:293874/146‑1 (MQ=255)                                                                                                           tACATGGCAGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCAAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAg                                              >  5:293874/1‑146 (MQ=255)                                                                                                              aTGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTg                                        >  6:100470/1‑149 (MQ=255)                                                                                                               tggccgtggccgAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGGTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGc                                       >  7:92570/1‑149 (MQ=255)                                                                                                                 gccgtggccgAGGCCATTGGCGAC‑GGGTAGAACGGCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTc                                     <  7:248860/149‑1 (MQ=255)                                                                                                                    gtggccgAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGTGCGGCAATGAAGTACGGGATCAGGTACTGCTCCtt                                  <  3:272670/149‑1 (MQ=255)                                                                                                                    gtggccgAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCtt                                  <  5:182406/149‑1 (MQ=255)                                                                                                                             agatctGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGctt                          <  7:35386/143‑1 (MQ=255)                                                                                                                                 ttGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTc                     <  5:331195/149‑1 (MQ=255)                                                                                                                                    gCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGctt                          >  8:35386/1‑141 (MQ=255)                                                                                                                                      gAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTCGAGaa                <  5:326733/149‑1 (MQ=255)                                                                                                                                       aC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTCGAGAAc               >  5:23433/1‑149 (MQ=255)                                                                                                                                        c‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTCGAGAACt              <  5:100470/149‑1 (MQ=255)                                                                                                                                             tAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTCGAGAACTtctc          >  2:219891/1‑149 (MQ=255)                                                                                                                                               gAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTCGAGAACTTCTCg         <  8:109953/148‑1 (MQ=255)                                                                                                                                                 aCGCCTGTACCTGGTCGGCGAGGAAGCCGTTGCCATTCAGCCAAAGGGCCAGGTTCATCATGTCTACGACGGTCGTACCGGGGTGCGCGGCAATGAATTACCGGATCAGGTACTGATCCTAGACCGCTTCTATCGAGAAATTCTCGaa       >  4:306675/1‑148 (MQ=255)                                                                                                                                                  cGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTc                     <  2:222774/133‑1 (MQ=255)                                                                                                                                                  cGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTc                     >  1:222774/1‑133 (MQ=255)                                                                                                                                                     cTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTCGAGAACTTCTCGAACATgc  >  3:7409/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GTAGCGCAAGAACGCCTTGTGCAGACGGCGTTGCTCGTCGCTCTTGACGATCTCCACCCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTGCCTGAGTGGTACATGGCCGTGGCCGAGGCCATTGGCGAC‑GGGTAGAACGCCTGTACCTGGTCGGCGCGGAAGCCGTTGCCCTTCAGCCACAGGGCCAGGTTCATCATGTCTTCGTCGGTGGTACCGGGGTGCGCGGCAATGAAGTACGGGATCAGGTACTGCTCCTTGCCCGCTTCTTTCGAGAACTTCTCGAACATGC  >  NC_002947/5538997‑5539292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.