New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5545321 =	NA (NA)	5 (0.090)	5/256	NT	8.1%	intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	= 5621245	58 (1.020)					coding (19/774 nt)	PP_4939	hypothetical protein

CGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCT  >  NC_002947/5621104‑5621385                                                                                                                                              |                                                                                                                                              cGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCAttt                                                                                                                                        <  7:242886/149‑1 (MQ=255) cGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCAttt                                                                                                                                        <  3:223081/149‑1 (MQ=255)     aTGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGaaa                                                                                                                                    <  7:154257/149‑1 (MQ=255)       gCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAg                                                                                                                                  >  3:334789/1‑149 (MQ=255)         acaGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCCCAACTGGTCACGCCGAGCGGTCCGTCACTCACATTTGAAAAgcg                                                                                                                                >  1:356136/1‑149 (MQ=255)         acaGCATCGTCGCCAGAGTCTTCGGTGATGAAAACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGACCACAACTGGTCAAGACGAGCGTGACGTCACTCTCATTTGAAAAgcg                                                                                                                                >  1:226781/1‑149 (MQ=255)             cATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAgc                                                                                                                                 >  1:238686/1‑144 (MQ=255)             cATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAgc                                                                                                                                 <  2:238686/144‑1 (MQ=255)                 gtcgCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGAt                                                                                                                        >  4:75790/1‑149 (MQ=255)                      cAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCt                                                                                                                   >  4:153217/1‑149 (MQ=255)                        gagTCTTCGGTTATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTTGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGAGCACCGGATTCCCTcc                                                                                                                 <  2:305806/149‑1 (MQ=255)                                ggTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACg                                                                                                         <  4:76920/149‑1 (MQ=255)                                        aTACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGTATTCCCTCCGCATTACGACTAT‑Cgg                                                                                                >  3:338499/1‑149 (MQ=255)                                            cTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggc                                                                                             <  6:236643‑M2/149‑51 (MQ=255)                                            cTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGaaa                                                                                                                                    >  4:238776/1‑110 (MQ=255)                                            cTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGaaa                                                                                                                                    <  3:238776/110‑1 (MQ=255)                                            cTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCtt                                                                                            <  5:310510/149‑1 (MQ=255)                                             tCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCtt                                                                                            >  2:275351/1‑148 (MQ=255)                                             tCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCtt                                                                                            >  6:52840/1‑148 (MQ=255)                                               gcgAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTc                                                                                           <  2:351909/147‑1 (MQ=255)                                                  aaTGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTcaacaa                                                                                      >  2:79537/1‑149 (MQ=255)                                                    tGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAAcc                                                                                    <  4:334789/149‑1 (MQ=255)                                                           ggTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCt                                                                             <  5:260035/149‑1 (MQ=255)                                                            gtgtTGTAGCGATCGAAACTCTCTAGGGTTTCTTTGATCAGATCTAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTTAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGTCCTTCAACAACCCGCTCCTg                                                                            <  2:226781/149‑1 (MQ=255)                                                                  tAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcg                                                                         <  3:284699‑M2/147‑71 (MQ=255)                                                                  tAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGc                                                                         >  8:331467/1‑146 (MQ=255)                                                                      gATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGcatctaaa                                                                  >  6:203196/1‑142 (MQ=255)                                                                      gATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAg                                                                  >  4:314702/1‑149 (MQ=255)                                                                       aTCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgtt                                                                  >  4:284699‑M2/1‑72 (MQ=255)                                                                          gAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGctct                                                              <  1:352228/149‑1 (MQ=255)                                                                          gAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGctct                                                              >  2:352228/1‑149 (MQ=255)                                                                          gAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGctct                                                              >  3:338640/1‑149 (MQ=255)                                                                            aaCTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGctct                                                              <  5:52840/147‑1 (MQ=255)                                                                               tctcAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCg                                                                                                                           <  6:225984/84‑1 (MQ=255)                                                                               tctcAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCg                                                                                                                           >  5:225984/1‑84 (MQ=255)                                                                               tctcAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACCACGAGCGTGACGTCACTCTCAATTGAAAAGCTCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGtt                                                          >  5:370231/1‑148 (MQ=255)                                                                                   aaGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGAt                                                     <  1:275351/149‑1 (MQ=255)                                                                                    ctggTGTCTTTGAGCAGATCCAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCTCTCCTGGGCGTGAAAGCTCTTGTTTAGATg                                                    <  2:356136/147‑1 (MQ=255)                                                                                     gggTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATg                                                    <  1:79537/149‑1 (MQ=255)                                                                                       gtgtCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGccc                                                 <  3:153217/149‑1 (MQ=255)                                                                                            tttGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactc                                                             >  6:132479‑M2/1‑51 (MQ=255)                                                                                                aGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGa                                        >  3:277079/1‑149 (MQ=255)                                                                                                aGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGa                                        >  5:123374/1‑149 (MQ=255)                                                                                                 gCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGAc                                       >  8:49267/1‑149 (MQ=255)                                                                                                 gCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGAc                                       >  5:159322/1‑149 (MQ=255)                                                                                                 gCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGAc                                       >  5:130939/1‑149 (MQ=255)                                                                                                  cAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACACTCATTTGAAAAGCGCACCGGATACCCTCCGCATTACGACTAT‑CGGCCTACAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCACCTTCAGACg                                      >  7:297211/1‑149 (MQ=255)                                                                                                      tCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAg                                   <  4:98940/148‑1 (MQ=255)                                                                                                           ccGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTg                             >  1:33857/1‑149 (MQ=255)                                                                                                             gCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCa                                          >  5:144572/1‑134 (MQ=255)                                                                                                             gCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCa                                          <  6:144572/134‑1 (MQ=255)                                                                                                               ccACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacgcactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtgggcacagcaagctgtgccgacagg                          >  5:236643‑M2/1‑32 (MQ=255)                                                                                                                 acaACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATg                        >  5:319358/1‑148 (MQ=255)                                                                                                                      tGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTc                                                                                           >  6:96128/1‑76 (MQ=255)                                                                                                                      tGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTc                                                                                           <  5:96128/76‑1 (MQ=255)                                                                                                                      tGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGAc                   >  3:118941/1‑148 (MQ=255)                                                                                                                        gTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGcc                                                  <  6:331757/115‑1 (MQ=255)                                                                                                                        gTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGcc                                                  >  5:331757/1‑115 (MQ=255)                                                                                                                         tCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATg               <  7:331467/149‑1 (MQ=255)                                                                                                                              acgaGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTg                             >  2:359261/1‑130 (MQ=255)                                                                                                                              acgaGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTg                             <  1:359261/130‑1 (MQ=255)                                                                                                                                    gTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGc    <  3:75790/149‑1 (MQ=255)                                                                                                                                       aCGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCTTTACGACTAT‑CGGCCTTCAACATCCCGCTCCTGTGCGTGAAATGTCTTGTTTAGTTGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGTGCCt  <  8:297211/148‑1 (MQ=255)                                                                                                                                              |                                                                                                                                              CGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAT‑CGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCT  >  NC_002947/5621104‑5621385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.