New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5647616	54 (0.950)	3 (0.060)	3/248	NT	5.5%	intergenic (‑29/‑125)	PP_4955/elaA	hypothetical protein/acetyltransferase
	?	NC_002947	= 5647641	51 (0.940)					intergenic (‑54/‑100)	PP_4955/elaA	hypothetical protein/acetyltransferase

CAGCTATCGGCCACCAGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCTGCAAGCACCACGCCGACCTCGGCAAGGAGC  >  NC_002947/5647493‑5647789                                                                                                                                                     |                                                                                                                                                     cAGCTATCGGCCACCAGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAcgcg                                                                                                                                                      >  4:236409/1‑149 (MQ=255) cAGCTATCGGCCACCAGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCg                                                                                                                                                      <  3:164381/149‑1 (MQ=255) cAGCTATCGGCCACCAGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCg                                                                                                                                                      >  1:317881/1‑149 (MQ=255) cAGCTATCGGCCACCAGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCg                                                                                                                                                      >  5:150230/1‑149 (MQ=255)   gCTATCGGCCACCAGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGgt                                                                                                                                                    <  2:30724‑M2/149‑3 (MQ=255)       tCGGCCACCAGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAATACAAAGCAGTGTCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGgtt                                                                                                                                                   >  7:235935‑M2/1‑143 (MQ=255)       tCGGCCACCAGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGgttgcc                                                                                                                                                <  6:247961‑M2/149‑7 (MQ=255)           ccaccaGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAgg                                                                                                                                            <  2:344833/149‑1 (MQ=255)           ccaccaGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAgg                                                                                                                                            <  8:235447/149‑1 (MQ=255)            caccaGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAggg                                                                                                                                           <  5:359611/149‑1 (MQ=255)             accaGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGc                                                                                                                                          <  5:247961/149‑1 (MQ=255)                 ggCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCg                                                                                                                                      >  2:340839/1‑149 (MQ=255)                   cGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGc                                                                                                                                    <  4:293847/149‑1 (MQ=255)                    gTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGc                                                                                                                                    >  3:257035/1‑148 (MQ=255)                       gCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCaa                                                                                                                                 <  2:144856/148‑1 (MQ=255)                              gTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCa                                                                                                                         >  5:201199/1‑149 (MQ=255)                                gACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCAtt                                                                                                                       >  6:329999/1‑149 (MQ=255)                                 aCCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGCTTGCCGAGGGCAGCGGCCAATAGTGTCAtt                                                                                                                       <  1:30724/148‑1 (MQ=255)                                   ccGGGGCAGGTGTTGCCAGCATCGTTGCGAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAg                                                                                                                    >  1:201768/1‑149 (MQ=255)                                       ggCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAg                                                                                                                                             <  5:356621/120‑1 (MQ=255)                                       ggCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAg                                                                                                                                             >  6:356621/1‑120 (MQ=255)                                               ttGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGc                                                                                                                   <  4:291506/138‑1 (MQ=255)                                               ttGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGc                                                                                                                   >  3:291506/1‑138 (MQ=255)                                               ttGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTg                                                                                                         <  3:266454/148‑1 (MQ=255)                                               ttGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTg                                                                                                         <  6:201199/148‑1 (MQ=255)                                               ttGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTg                                                                                                         <  1:340839/148‑1 (MQ=255)                                                 gCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAgt                                                                                                                             <  4:357751/126‑1 (MQ=255)                                                 gCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAgt                                                                                                                             >  3:357751/1‑126 (MQ=255)                                                               cAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATgcag                                                                                         >  6:177655/1‑148 (MQ=255)                                                                    aTCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGcc                                                                                                      >  5:52949/1‑130 (MQ=255)                                                                    aTCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGcc                                                                                                      <  6:52949/130‑1 (MQ=255)                                                                        cAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGTGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCgatga                                                                               <  1:285862/149‑1 (MQ=255)                                                                        cAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCgatga                                                                               >  8:25280/1‑149 (MQ=255)                                                                        cAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCgatga                                                                               >  2:197608/1‑149 (MQ=255)                                                                          gAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAACACATGCAGCATGCGATGATc                                                                             <  2:317881/149‑1 (MQ=255)                                                                          gAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATATCGCCTCTATTTTGGCCGAAACACATGCAGCATGCGATGATc                                                                             <  6:150230/149‑1 (MQ=255)                                                                            acacAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGACAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGa                                                                           <  3:3887/149‑1 (MQ=255)                                                                                  aGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGcc                                                                                                      >  4:297505/1‑116 (MQ=255)                                                                                    cAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATc                                                                   <  3:168338/149‑1 (MQ=255)                                                                                                  tcccGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGACGAAGCACATGCAGCATGCGATGATCGAGCCCCAACAACGGAGTACGTGc                                                     >  8:205314/4‑149 (MQ=255)                                                                                                    aCGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTc                                                         <  5:108487/143‑1 (MQ=255)                                                                                                    aCGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTg                                                      <  4:257035/146‑1 (MQ=255)                                                                                                    aCGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGccc                                                   <  7:205314/149‑1 (MQ=255)                                                                                                    aCGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCAACCAAGGAGTTc                                                         >  6:108487/1‑143 (MQ=255)                                                                                                    aCGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCCAGACCCATCCAAGGAGTTCGtcaca                                                   >  5:285426/1‑145 (MQ=255)                                                                                                      gtgcTTTCGCAATGGATGGCAACACTGCCTGTGAGATTTCACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATg                                                                                            <  6:28866/103‑1 (MQ=255)                                                                                                      gTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAATCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCAt                                                 >  1:256262/1‑149 (MQ=255)                                                                                                         cTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGt                                               <  5:345922/148‑1 (MQ=255)                                                                                                          tttCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGt                                               >  4:155728/1‑147 (MQ=255)                                                                                                          tttCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGt                                               <  3:155728/147‑1 (MQ=255)                                                                                                          tttCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTc                                              >  5:80111/1‑148 (MQ=255)                                                                                                                aaTGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGAc                                       >  6:52200/1‑149 (MQ=255)                                                                                                                    gAGGGCAACACTGCCAGTGAGATTACACAAAGCGgttgccctccattgcgaaaggacgtgagcatgcggccactgctttgtgttctgggattgctggcaacgatgctggcaacacctgccccgggtcacgccaagctacgcctggtggc                                   <  1:354827‑M2/149‑116 (MQ=255)                                                                                                                     aGGGCAACACTGCCAGTGAGATTACACAAAGCGgttgccctccattgcgaaaggacgtgagcatgcggccactgctttgtgttctggga                                                                                              <  1:18772‑M2/89‑57 (MQ=255)                                                                                                                     aGGGCAACACTGCCAGTGAGATTACACAAAGCGgttgccctccattgcgaaaggacgtgagcatgcggccactgctttgtgttctggga                                                                                              >  2:18772‑M2/1‑33 (MQ=255)                                                                                                                       ggCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCt                                <  7:25280/149‑1 (MQ=255)                                                                                                                       ggCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCt                                <  1:197608/149‑1 (MQ=255)                                                                                                                       ggCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCt                                <  5:177655/149‑1 (MQ=255)                                                                                                                       ggCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCt                                >  2:212113/1‑149 (MQ=255)                                                                                                                         cAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACACGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCTg                               >  5:48276/1‑148 (MQ=255)                                                                                                                                     tGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCTGCAAGCACCACGcc                  >  6:10464/1‑149 (MQ=255)                                                                                                                                                aaaGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACt                                      <  4:162618/118‑1 (MQ=255)                                                                                                                                                aaaGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACt                                      >  3:162618/1‑118 (MQ=255)                                                                                                                                                aaaGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCTGCAAGCACCACGCCGCCCTCGGc         >  4:307020/1‑147 (MQ=255)                                                                                                                                                aaaGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCTGCAAGCACCACGCCGACCTCGGc         >  6:301879/1‑147 (MQ=255)                                                                                                                                                aaaGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCTGCAAGCACCACGCCGACCTCGGc         >  4:35910/1‑147 (MQ=255)                                                                                                                                                  agaggTTGCCGATGGCAGCGGCCAATAGAGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTG‑CCATGTCAATCGACTGGATCTGCAAGCACCACGCCGACCTCGGCAAGGa    <  6:285426/146‑1 (MQ=255)                                                                                                                                                   gCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCTGCAAGCACCACGCCGACCTCGGCAAGGa    <  2:201768/149‑1 (MQ=255)                                                                                                                                                     ggTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCTGCAAGCACCACGCCGACCTCGGCAAGGagc  <  6:80111/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CAGCTATCGGCCACCAGGCGTAGCTTGGCGTGACCCGGGGCAGGTGTTGCCAGCATCGTTGCCAGCAATCCCAGAACACAAAGCAGTGGCCGCATGCTCACGTCCTTTCGCAATGGAGGGCAACACTGCCAGTGAGATTACACAAAGCGGTTGCCGAGGGCAGCGGCCAATAGTGTCATTTAGCCTCTATTTTGGCCGAAGCACATGCAGCATGCGATGATCGAGCCCCATCCAAGGAGTTCGTGCCCATGTCAATCGACTGGATCTGCAAGCACCACGCCGACCTCGGCAAGGAGC  >  NC_002947/5647493‑5647789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.