New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5985929	67 (1.180)	4 (0.070)	4/250	NT	6.3%	coding (196/987 nt)	PP_5245	AraC family transcriptional regulator
	?	NC_002947	= 5985981	55 (1.010)					coding (248/987 nt)	PP_5245	AraC family transcriptional regulator

CGGTTCTTGCCTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGGGGCGGGCCGGGTTACTGAATGGCTATCGCTGCACCACC  >  NC_002947/5985836‑5986129                                                                                                                                                  |                                                                                                                                                      cGGTTCTTGCCTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGcgg                                                                                                                                                    >  3:313604‑M2/1‑146 (MQ=255)   gTTCTTGCCTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGATGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGcggcc                                                                                                                                                  <  2:173406‑M2/149‑6 (MQ=255)    ttCTTGCCTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGccc                                                                                                                                                 >  4:202511/1‑149 (MQ=255)         gCCTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTgggg                                                                                                                                            >  2:191987/1‑149 (MQ=255)         gCCTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTggg                                                                                                                                             <  6:124223/148‑1 (MQ=255)         gCCTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTggg                                                                                                                                             <  6:46392/148‑1 (MQ=255)           cTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGcggcc                                                                                                                                                  >  3:271119‑M2/1‑136 (MQ=255)           cTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGcggcc                                                                                                                                                  <  4:271119‑M2/141‑6 (MQ=255)           cTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTgg                                                                                                                                              >  6:241238/1‑145 (MQ=255)           cTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTgg                                                                                                                                              <  5:241238/145‑1 (MQ=255)           cTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGcc                                                                                                                                          >  6:289342/1‑149 (MQ=255)             gcagcaCGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTa                                                                                                                                        >  6:174118/1‑149 (MQ=255)              cagcaCGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTAt                                                                                                                                       <  3:248235/149‑1 (MQ=255)              cagcaCGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTAt                                                                                                                                       <  5:5690/149‑1 (MQ=255)              cagcaCGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGATACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTAt                                                                                                                                       <  3:31241/149‑1 (MQ=255)               agcaCGGCATTATCGGCTGCTGACCTTGGCCGAGGGGCAAGCATTGGTACGCGGCTCATGCGGCCTGATGGTAGTGGCCGAGTGGCGCATGGATGACTTGGCGGAGGCCGTCTACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTAt                                                                                                                                       <  3:191907/148‑1 (MQ=255)                gcaCGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCTGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATg                                                                                                                                      >  4:156187/1‑148 (MQ=255)                gcaCGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACTGGCGCCTGGAAGACTTGCAGGAGGCCGTCGACCTGATGCTGGTGCCGGGAGGCCCTGCGGCCTaa                                                                                                                                       >  4:191907/1‑146 (MQ=255)                    ggCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATc                                                                                                                                 <  1:191987/149‑1 (MQ=255)                            cGGCTGCTGACCTTGGCCGA‑GGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑Gc                                                                                                                         >  8:120456/1‑147 (MQ=255)                             ggCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCa                                                                                                                       <  3:202511/149‑1 (MQ=255)                                       cTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAgc                                                                                                             >  4:292595/1‑149 (MQ=255)                                       cTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAgc                                                                                                             >  1:197029/1‑149 (MQ=255)                                            ccGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCgctgg                                                                                                        >  6:246440/1‑149 (MQ=255)                                            ccGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCgctgg                                                                                                        <  7:237674/149‑1 (MQ=255)                                                ggggCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGc                                                                                                    <  2:61132/149‑1 (MQ=255)                                                 gggCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGcc                                                                                                   <  5:174118/149‑1 (MQ=255)                                                 gggCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGcc                                                                                                   >  8:89040/1‑149 (MQ=255)                                                         aGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGCCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCg                                                                                           >  6:257719/1‑149 (MQ=255)                                                            ggTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTgc                                                                                        >  1:85311/1‑149 (MQ=255)                                                                 gcgGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAg                                                                                   <  7:89040/149‑1 (MQ=255)                                                                  cgGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAgg                                                                                  <  7:120456/149‑1 (MQ=255)                                                                        aTGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAgc                                                                            >  8:119575/1‑149 (MQ=255)                                                                        aTGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAgc                                                                            >  6:308895/1‑149 (MQ=255)                                                                            ggCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCtt                                                                        <  2:85311/149‑1 (MQ=255)                                                                              ccTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAgg                                                                                  <  3:12424/137‑1 (MQ=255)                                                                              ccTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAgg                                                                                  >  4:12424/1‑137 (MQ=255)                                                                              ccTGAAGGTAGGGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGTTCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCg                                                                      <  1:257717/149‑1 (MQ=255)                                                                               cTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCgg                                                                     >  8:224224/1‑149 (MQ=255)                                                                                    ggTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCa                                                                <  7:119575/149‑1 (MQ=255)                                                                                    ggTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCa                                                                <  5:308895/149‑1 (MQ=255)                                                                                     gTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGcggccactaccttcaggccgcatgagccgcgtaccactgcttgcccctcggccaaggtcagcagccgatattg                                                                              >  5:269788‑M2/1‑62 (MQ=255)                                                                                     gTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGcggccactaccttcaggccgcatgagccgcgtaccactgcttgcccctcggccaaggtcagcagccgatattg                                                                              <  6:269788‑M2/135‑74 (MQ=255)                                                                                             cGACCGGCGCATGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGcggtcactaccttcaggcagcatgagccgcgtaccactgcttgcccctcggccaaggtcagcagacgatattgacgtgatgcaggcaagaaccgg                                                        <  4:260725‑M2/149‑96 (MQ=255)                                                                                               aCCGGCGCCTGGATGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCggg                                                     <  1:173406/149‑1 (MQ=255)                                                                                               aCCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCggg                                                     <  3:292595/149‑1 (MQ=255)                                                                                                   gcgcCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGgtgt                                                 <  2:197029/149‑1 (MQ=255)                                                                                                   gcgcCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGgtgt                                                 >  5:226656/1‑149 (MQ=255)                                                                                                    cgcCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGtt                                                <  6:226656/149‑1 (MQ=255)                                                                                                    cgcCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGtt                                                >  4:123646/1‑149 (MQ=255)                                                                                                     gcCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCAGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTc                                               >  5:262370/1‑149 (MQ=255)                                                                                                      ccTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTcc                                              <  8:210040/149‑1 (MQ=255)                                                                                                             gACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGcggtcactaccttcaggcctcatgagccgcgtaccactgcttgcccctcggccaaggtcagcagccgatattgccgtgctgcaggcaagaaccggttggcgatggcgaat                                         >  3:260725‑M2/1‑38 (MQ=255)                                                                                                             gACTTGCCGGAGGCCGCCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTggg                                       <  5:257719/149‑1 (MQ=255)                                                                                                                ttGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTcc                                              <  6:123251/139‑1 (MQ=255)                                                                                                                ttGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTcc                                              >  5:123251/1‑139 (MQ=255)                                                                                                                 tGCCGGAGGCCGTCGACCTATTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGgggcgg                                   >  6:191588/1‑149 (MQ=255)                                                                                                                     ggAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGGGGCGGGCCg                               <  5:246440/149‑1 (MQ=255)                                                                                                                      gAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTc                                               <  6:108889/132‑1 (MQ=255)                                                                                                                      gAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTc                                               >  5:108889/1‑132 (MQ=255)                                                                                                                        ggCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGGGGCGGGCCGGGt                            <  5:127167/149‑1 (MQ=255)                                                                                                                           cGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGGGGCGGGCCGGGTTAc                         <  5:191588/149‑1 (MQ=255)                                                                                                                                aCCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCTAGCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGGGGCGGGCCGGGTTACTGaa                     >  1:80151/1‑149 (MQ=255)                                                                                                                                aCCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAATGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGTGGTGTTCCTGCTGGGGCGTGCCGGGTTACTTAAt                    >  2:265369/1‑149 (MQ=255)                                                                                                                                           gTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCctg                                            <  8:321656/114‑1 (MQ=255)                                                                                                                                           gTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCctg                                            >  7:321656/1‑114 (MQ=255)                                                                                                                                           gTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGGGGCGGGCCGGGTTACTGAATGGCTATCGCTg         >  7:216096/1‑149 (MQ=255)                                                                                                                                            tGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGGGGCGGGCCGGGTTACTGAATGGCTATCGCTGc        <  7:224224/149‑1 (MQ=255)                                                                                                                                               cGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGGGGCGGGCCGGGTTACTGAATGGCTATCGCTGcac      >  4:240941/1‑148 (MQ=255)                                                                                                                                                  gcggcCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGGGGCGGGCCGGGTTACTGAATGGCTATCGCTGCaccacc  <  3:240941/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      CGGTTCTTGCCTGCAGCACGGCAATATCGGCTGCTGACCTTGGCCGAGGGGCAAGCAGTGGTACGCGGCTCATGCGGCCTGAAGGTAGTGGCCGACCGGCGCCTGGAAGACTTGCCGGAGGCCGTCGACCTGTTGCTGGTGCCGGGCGGCCCTGGGGCCTATGACATCGCCCT‑GCCAGGGATCGAGCGCTGGCTGCCCAAGGCCGTGCGCCAGGCAAAGCGCTTCGGTGCCATCTGCACCGGGGTGTTCCTGCTGGGGCGGGCCGGGTTACTGAATGGCTATCGCTGCACCACC  >  NC_002947/5985836‑5986129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.