New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 106235 | 67 (1.140) | 6 (0.110) | 6/240 | NT | 8.7% | coding (102/1518 nt) | PP_0101 | sulfate transporter |
? | NC_002947 | = 106261 | 63 (1.150) | coding (128/1518 nt) | PP_0101 | sulfate transporter |
CAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/106080‑106235 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccgccgATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGT < NC_002947/106261‑106114 CAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCAT > 7:38478/1‑149 AGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGTTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATG > 5:300671/1‑149 GGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTCGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCC < 4:216156/149‑1 GGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCG < 4:53223/149‑1 GAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGC > 2:133345/1‑149 AATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCC > 4:31270/1‑149 AGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCC > 6:319658/1‑149 AACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTTGTCTTCCTTGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCAT < 2:232391/149‑1 ACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGCCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATG < 5:319658/149‑1 CATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCACTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGC < 1:107123/149‑1 GCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGG > 1:204693/1‑114 GCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGG < 2:204693/114‑1 GCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCA > 1:133345/1‑149 CCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCAC > 3:119866/1‑149 CGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACC < 5:50707/149‑1 GATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGT < 5:226955/149‑1 CAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/106080‑106235 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccgccgATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGT < NC_002947/106261‑106114 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |