New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 134530	56 (0.950)	3 (0.050)	3/250	NT	5.5%	coding (426/1938 nt)	PP_0129	GGDEF domain‑containing protein
	?	NC_002947	= 134587	48 (0.840)					coding (483/1938 nt)	PP_0129	GGDEF domain‑containing protein

CATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/134380‑134530 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcTTCTTCACTCGGCTTGCCAAGGGCCGACAGCGCGCGCCCCTGCAAGCCGCTCAACTCGCCCAACAGCGGCGGCAGCTCGCGTGACTGGGCAACCCCGCCCTCGAGCTTCTTCGCCAGTTTTTTCAATGGCCGCGAGATATCGCTGGG  <  NC_002947/134587‑134441                                                                                                                                                                                                                                                                                                            CATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCGAACTGCAAGGCCTGCCCCTGCCCAGCGATAACTCGCGGCCATTGAAAAATCTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGG                                                                                                                                                       <  1:116781/149‑1    GAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGC                                                                                                                                                     >  4:157556/1‑148                                        CCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCTTCTTCACTCGGCTTGCCAAGGGCCGACAGCGCGCGC                                                                                                                >  2:9054/1‑149                                                  GGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCTTCTTCACTCGGCTTGCCAACGGCCGACAGCGCGCGCCCCTGCAAGC                                                                                                      <  1:9054/149‑1                                                                    GATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCTTCTTCACTCGGCTTGCCAAGGGCCGACAGCGCGCGCCCCTGCAAGCCGCTCAACTCGCCCAACA                                                                                    <  4:252111/149‑1                                                                                                                                                      GCTTCTTCACTCGGCTTGCCAAGGGCCGACAGCGCGCGCCCCTGCAAGCCGCTCAACTCGCCCAACAGCGGCGGCAGCTCGCGTGACTGGGCAACCCCGCCCTCGAGCTTCTTCGCCAGTTTTTTCAATGGCCGCGAGATATCGCTGGG  >  3:34170/1‑149                                                                                                                                                                                                                                                                                                            CATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/134380‑134530 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcTTCTTCACTCGGCTTGCCAAGGGCCGACAGCGCGCGCCCCTGCAAGCCGCTCAACTCGCCCAACAGCGGCGGCAGCTCGCGTGACTGGGCAACCCCGCCCTCGAGCTTCTTCGCCAGTTTTTTCAATGGCCGCGAGATATCGCTGGG  <  NC_002947/134587‑134441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.