New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 13453056 (0.950)3 (0.050) 3/250 NT 5.5% coding (426/1938 nt) PP_0129 GGDEF domain‑containing protein
?NC_002947 = 134587 48 (0.840)coding (483/1938 nt) PP_0129 GGDEF domain‑containing protein

GAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCTGCT  >  NC_002947/134383‑134677
                                                                                                                                                   |                                                                                                                                                   
gAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGC                                                                                                                                                     >  4:157556‑M1/1‑148 (MQ=255)
 aaCCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGa                                                                                                                                                   <  3:104604/149‑1 (MQ=255)
  gtgcggTCAGCGCATCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAg                                                                                                                                                  >  1:88991/5‑149 (MQ=255)
  aCCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAg                                                                                                                                                  >  2:122935/1‑149 (MQ=255)
        tCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGc                                                                                                                                            >  4:215924/1‑149 (MQ=255)
          aGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCgg                                                                                                                                          >  2:325311/1‑149 (MQ=255)
           gCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGc                                                                                                                                         <  5:329977/149‑1 (MQ=255)
                   cTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAg                                                                                                                                   >  1:113459/1‑147 (MQ=255)
                   cTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAg                                                                                                                                   <  2:113459/147‑1 (MQ=255)
                      aCCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCa                                                                                                                                    >  2:122779/1‑143 (MQ=255)
                      aCCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCa                                                                                                                                    <  1:122779/143‑1 (MQ=255)
                               gTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTc                                                                                                                     <  4:361475/149‑1 (MQ=255)
                                ttGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCg                                                                                                                    >  5:186023/1‑149 (MQ=255)
                                   gCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGcc                                                                                                                 <  7:27431/149‑1 (MQ=255)
                                    ccAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCttcttcactcggcttgccaagggccgacagcgcgcgc                                                                                                                >  2:9054‑M1/1‑112 (MQ=255)
                                     cAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCt                                                                                                               >  8:225628/1‑149 (MQ=255)
                                           cAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGc                                                                                                           >  7:3733/1‑147 (MQ=255)
                                           cAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGc                                                                                                           <  6:186023/147‑1 (MQ=255)
                                           cAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCaa                                                                                                         >  4:34170/1‑149 (MQ=255)
                                              ggCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCttcttcactcggcttgccaacggccgacagcgcgcgcccctgcaagc                                                                                                      <  1:9054‑M1/149‑48 (MQ=255)
                                               gCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGTAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGt                                                                                                                      >  6:41372/1‑132 (MQ=255)
                                               gCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGTAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGt                                                                                                                      <  5:41372/132‑1 (MQ=255)
                                                cctgcccctgccCCGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGa                                                                                                    <  6:210093/149‑1 (MQ=255)
                                                cctgcccctgccCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGa                                                                                                    <  1:109494/149‑1 (MQ=255)
                                                cctgccccagccCAGCGTTATCTCGCGGCCATTGAAAAAACTGGCGATGAAGCGCGAGGGCGGGGTTGCCCAGGCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGa                                                                                                    <  5:234531/149‑1 (MQ=255)
                                                  tgcccctgcccAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTACCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCgg                                                                                                                   <  3:235424/132‑1 (MQ=255)
                                                  tgcccctgcccAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTACCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCgg                                                                                                                   >  4:235424/1‑132 (MQ=255)
                                                     ccctgcccAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGTGGGCGGGGTTGCCCATTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTga                                                                                                <  8:233480/148‑1 (MQ=255)
                                                          cccAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAgc                                                                                          >  3:34170‑M2/1‑147 (MQ=255)
                                                              gCGATATCTCGCGGCCATTGAAAAAACTGGCGATGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGACTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGa                                                                                      >  4:318391/1‑149 (MQ=255)
                                                                gATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCttcttcactcggcttgccaagggccgacagcgcgcgcccctgcaagccgctcaactcgcccaaca                                                                                    <  4:252111‑M1/149‑66 (MQ=255)
                                                                  tatCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAg                                                                                                   >  8:350122/1‑132 (MQ=255)
                                                                  tatCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAg                                                                                                   <  7:350122/132‑1 (MQ=255)
                                                                   atCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCgg                                                                                 >  5:372767/1‑149 (MQ=255)
                                                                      tcGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGCCAAGCCGAGAGAAGAAGCCCGCCCCGGtt                                                                               >  3:171403/1‑148 (MQ=255)
                                                                        gcgGCCATTTAAATAACTGGGGAATTTTCTGGTGGTGGGTGGTGCCGTGTCTGGCGAGCTGGGGCCGCTGTTTGGAGAGTTGTGCGGATTGCAGGGGCTCGCGCTGTCTGCCCTTGTCAAGCCGAGTGAAGAAGCCGGAGCCGGtttt                                                                             <  4:171403/148‑1 (MQ=255)
                                                                                 gAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCgg                                                                    <  7:225628/148‑1 (MQ=255)
                                                                                  aaaaaaCTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGgtt                                                                  >  6:15245/1‑149 (MQ=255)
                                                                                  aaaaaaCTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGgtt                                                                  <  3:157556/149‑1 (MQ=255)
                                                                                    aaaaCTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTgaa                                                                                               >  8:219010/1‑118 (MQ=255)
                                                                                    aaaaCTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTgaa                                                                                               <  7:219010/118‑1 (MQ=255)
                                                                                     aaaCTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGgttgtt                                                               <  8:3733/149‑1 (MQ=255)
                                                                                      aaCTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGttt                                                              <  5:175915/149‑1 (MQ=255)
                                                                                      aaCTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGttt                                                              >  6:175915/1‑149 (MQ=255)
                                                                                           gCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGttt                                                              <  2:171014/144‑1 (MQ=255)
                                                                                           gCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGttt                                                              >  1:171014/1‑144 (MQ=255)
                                                                                             gaagaaGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGcc                                                       >  4:343415/1‑149 (MQ=255)
                                                                                               agaagCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCcgc                                                     <  6:372767/149‑1 (MQ=255)
                                                                                                  agCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGa                                                   <  3:215924/148‑1 (MQ=255)
                                                                                                     tCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAgg                                                 >  4:198548/1‑147 (MQ=255)
                                                                                                     tCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTCGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCAGACCAGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAgg                                                 >  6:91434/1‑147 (MQ=255)
                                                                                                      cGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAgg                                                 >  3:222776/1‑146 (MQ=255)
                                                                                                                    cctaGTCACGGGAGCTGCGGCGGCTGTTGGGAGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCGGTGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGcc                                                       <  5:318317/123‑1 (MQ=255)
                                                                                                                    cccAGTCACGCGAGCTGACGCCGCTGTTGCGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTACGCAACCCGAGTCAAGAAGCCCGACACGCTATTCTGCCGCGGTTGTTAGGAAGcc                                                       >  6:318317/1‑126 (MQ=255)
                                                                                                                      cAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAg                               >  1:326184/1‑148 (MQ=255)
                                                                                                                           aCGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGc                         <  4:222776/149‑1 (MQ=255)
                                                                                                                           aCGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGc                         >  5:351965/1‑149 (MQ=255)
                                                                                                                             gcgAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCtt                       >  3:304843/1‑149 (MQ=255)
                                                                                                                               gAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTgc                     <  1:325311/149‑1 (MQ=255)
                                                                                                                                        ccgcTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCAcagg                                     >  3:172019/1‑124 (MQ=255)
                                                                                                                                        ccgcTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCAcagg                                     <  4:172019/124‑1 (MQ=255)
                                                                                                                                            tGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAgcccaacagcggcggcagctcgcgtgactgggcaaccccgccctcgagcttcttcgccagttttttcaatggccgcgagatatc        <  4:252111‑M2/149‑85 (MQ=255)
                                                                                                                                            tGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAg                               >  4:203734/1‑126 (MQ=255)
                                                                                                                                            tGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAg                               <  3:203734/126‑1 (MQ=255)
                                                                                                                                              ttGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTAc       <  2:88991/148‑1 (MQ=255)
                                                                                                                                                  gCttcttcactcggcttgccaagggccgacagcgcgcgcccctgcaagccgctcaactcgcccaacagcggcggcagctcgcgtgactgggcaaccccgccctcgagcttcttcgccagttttttcaatggccgcgagatatcgctggg  >  3:34170‑M1/1‑2 (MQ=255)
                                                                                                                                                  gCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCa                             <  2:371178/122‑1 (MQ=255)
                                                                                                                                                  gCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCa                             >  1:371178/1‑122 (MQ=255)
                                                                                                                                                  gCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTACctgct  >  2:163045/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCTGCT  >  NC_002947/134383‑134677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.