New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 570780 | 52 (0.880) | 4 (0.070) | 4/250 | NT | 7.7% | coding (1156/1395 nt) | yajR | transporter |
? | NC_002947 | = 570808 | 46 (0.810) | coding (1184/1395 nt) | yajR | transporter |
GCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGTAGCGCGGTGCTGTGTGCTATCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/570629‑570780 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcGGCTCGTTCATGCGCAAGGCGACGATCAGCCAGATAGCACA < NC_002947/570808‑570768 GCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGGCTGTTCCTGCACGGCGGGCTGAACACGGTGTTCCTCGGTAGCGCGGTGCTGTGTGCTATCT > 1:302748/1‑149 GCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGTAGCGCGGTGCTGTGTGCTATCT > 2:57443/1‑149 GCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGTAGCGCGGTGCTGTGTGCTATCT < 3:98666/149‑1 GCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGTAGCGAGGTGCTGTGTGCTATCT > 4:252100/1‑149 AATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGTAGCGCGGTGCTGTGTGCTATCTGGCGGCTCGTTCATGCGCAAGGC > 1:347988/1‑148 ACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGTAGCGCGGTGCTGTGTGCTATCTGGCGGCTCGTTCATGCGCAAGGCGACGATCAGCCAGATAG < 2:347988/149‑1 AGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGCAGCGCGGTGCTGTGTGCTATCTGGCGGCTCGTTCATGCGCAAGGCGACGATCAGCCAGATAGCACA < 3:44553/146‑1 AGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGCAGCGCGGTGCTGTGTGCTATCTGGCGGCTCGTTCATGCGCAAGGCGACGATCAGCCAGATAGCACA > 4:44553/1‑146 TTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGTAGCGCGGTGCTGTGTGCTATCTGG < 3:142997/74‑1 TTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGTAGCGCGGTGCTGTGTGCTATCTGG > 4:142997/1‑74 GCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGGCTGTTCCAGCACGGCGGGCTGAACACGGTGTTCCTCGGTAGCGCGGTGCTGTGTGCTATCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/570629‑570780 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcGGCTCGTTCATGCGCAAGGCGACGATCAGCCAGATAGCACA < NC_002947/570808‑570768 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |