| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 775280 | 65 (1.100) | 6 (0.110) | 5/242 | NT | 8.8% | intergenic (+89/‑82) | PP_0666/PP_0667 | hypothetical protein/ECF family RNA polymerase sigma‑70 factor |
| ? | NC_002947 | = 775297 | 64 (1.160) | intergenic (+106/‑65) | PP_0666/PP_0667 | hypothetical protein/ECF family RNA polymerase sigma‑70 factor | |||||
GCTGTGTGCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/775159‑775280‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgggcaATTGCGATAAGCAACGCTGCCCGGTTTGGTCATGGCAGGGATGATTTTGCGATCAGGCCGAGGCCTGCCCATATCAAGCAACTGGTCTGCGCTTTCAGCCTAGCGGTCACAGTGAATCCGGGCACCCAGTGCACACAGCGAACAC < NC_002947/775297‑775153 GCTGTGTGCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAATTGCGATAAGCAACGCTGCCCGGTTT < 1:55845/149‑1GCTGTGTGCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAATTGCGATAAGCAACGCTGCCCGGTT < 6:176079/148‑1 TGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAATTGCGATAAGCAACGCTGCCCGGTTTG > 7:229842/1‑139 TGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAATTGCGATAAGCAACGCTGCCCGGTTTG < 8:229842/139‑1 CCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAATTGCGATAAGCAACGCTGCCCGGTTTG < 7:293504/132‑1 CCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAATTGCGATAAGCAACGCTGCCCGGTTTG > 8:293504/1‑132 CGGGCAATTGCGATAAGCAACGCTGCCCGGTTTGGTCATGGCAGGGATGATTTTGCGATCAGGCCGAGGCCTGCCCATATCAAGCAACTGGTCTGCGCTTTCAGCCTAGCGGTCACAGTGAATCCGGGCACCCAGTGCACACAGCGAAC > 7:175837/1‑149 CGGGCAATTGCGATAAGCAACGCTGCCCGGTTTGGTCATGGCAGGGATGATTTTGCGATCAGGCCGAGGCCTGCCCATATCAAGCAACTGGTCTGCGCTTTCAGCCTAGCGGTCACAGTGAATCCGGGCACCCAGTGCACACAGCGAA > 1:274026/1‑148 CGGGCAATTGCGATAAGCAACGCTGCCCGGTTTGGTCATGGCAGGGATGATTTTGCGATCAGGCCGAGGCCTGCCCATATCAAGCAACTGGTCTGCGCTTTCAGCCTAGCGGTCACAGTGAATCCGGGCACCCAGTGCACACAGCGAA > 3:216183/1‑148 GGCAATTGCGATAAGCAACGCTGCCCGGTTTGGTCATGGCAGGGATGATTTTGCGATCAGGCCGAGGCCTGCCCATATCAAGCAACTGGTCTGCGCTTTCAGCCTAGCGGTCACAGTGAATCCGGGCACCCAGTGCACACAGCGAACAC < 2:274026/149‑1 GCTGTGTGCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/775159‑775280‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgggcaATTGCGATAAGCAACGCTGCCCGGTTTGGTCATGGCAGGGATGATTTTGCGATCAGGCCGAGGCCTGCCCATATCAAGCAACTGGTCTGCGCTTTCAGCCTAGCGGTCACAGTGAATCCGGGCACCCAGTGCACACAGCGAACAC < NC_002947/775297‑775153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |