New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 775280	65 (1.100)	6 (0.110)	5/242	NT	8.8%	intergenic (+89/‑82)	PP_0666/PP_0667	hypothetical protein/ECF family RNA polymerase sigma‑70 factor
	?	NC_002947	= 775297	64 (1.160)					intergenic (+106/‑65)	PP_0666/PP_0667	hypothetical protein/ECF family RNA polymerase sigma‑70 factor

GTGTTCGCTGTGTGCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAACTCTACCGTTCCCATCATGGCTGGATTCGCCAGTG  >  NC_002947/775153‑775444                                                                                                                                                 |                                                                                                                                                    gtgtTCGCTGTGTGCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATtgcc                                                                                                                                                 <  2:274026‑M2/149‑5 (MQ=255)   gtTCGCTGTGTGCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATtgcccg                                                                                                                                               >  7:175837‑M2/1‑143 (MQ=255)    ttCGCTGTGTGCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATtgcccg                                                                                                                                               >  1:274026‑M2/1‑142 (MQ=255)    ttCGCTGTGTGCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATtgcccg                                                                                                                                               >  3:216183‑M2/1‑142 (MQ=255)           tgtgCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGtca                                                                                                                                         <  5:56221/147‑1 (MQ=255)            gtgCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGtcatt                                                                                                                                       >  3:53208/1‑148 (MQ=255)               cACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGgtg                                                                                                                                            <  8:308371/140‑1 (MQ=255)               cACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGgtg                                                                                                                                            >  7:308371/1‑140 (MQ=255)               cACTGGGTGACCGGATTCACTGTGACCGCTTGGCTGAAAGAGCAGTCCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGTCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATc                                                                                                                                   <  7:76429/149‑1 (MQ=255)                         ccGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTAcc                                                                                                                          >  8:152850/1‑148 (MQ=255)                         ccGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCa                                                                                                                         >  1:195468/1‑149 (MQ=255)                           ggATTCACTGTGACCGCTAGGCTGAAATCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCAtt                                                                                                                       <  4:332668/149‑1 (MQ=255)                           ggATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCAtt                                                                                                                       <  8:81890/149‑1 (MQ=255)                            gATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATtg                                                                                                                      >  1:65898/1‑149 (MQ=255)                             aTTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATtgt                                                                                                                     <  2:195468/149‑1 (MQ=255)                               tCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATtgtg                                                                                                                    >  1:320803/1‑148 (MQ=255)                               tCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGCGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTAGCTTATCGCAATTGACCCGTGTCATTCATCCACGCAAACATtgtg                                                                                                                    >  8:255955/1‑148 (MQ=255)                                cACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGa                                                                                                                   <  5:59651/148‑1 (MQ=255)                                 aCTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGaa                                                                                                                  >  2:338838/1‑148 (MQ=255)                                    gtgACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGaataat                                                                                                              >  4:65646/1‑149 (MQ=255)                                       aCCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTc                                                                                                            <  7:255955/148‑1 (MQ=255)                                       aCCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTc                                                                                                            <  2:333694/148‑1 (MQ=255)                                               gCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCa                                                                                                   >  3:30259/1‑149 (MQ=255)                                                cTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTa                                                                                                      >  8:179756/1‑145 (MQ=255)                                                cTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTa                                                                                                      <  7:179756/145‑1 (MQ=255)                                                 tGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCAt                                                                                                  >  5:329502/1‑148 (MQ=255)                                                 tGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCAt                                                                                                  >  5:104469/1‑148 (MQ=255)                                                       cgcAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGcc                                                                                           <  7:274042/149‑1 (MQ=255)                                                          aGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAg                                                                                                     >  7:339635/1‑136 (MQ=255)                                                          aGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAg                                                                                                     <  8:339635/136‑1 (MQ=255)                                                          aGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGc                                                                                        <  6:329502/149‑1 (MQ=255)                                                           gACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGcc                                                                                       <  4:53208/149‑1 (MQ=255)                                                               aGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCAt                                                                                   <  2:65898/149‑1 (MQ=255)                                                               aGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCAt                                                                                   <  5:273612/149‑1 (MQ=255)                                                                 ttGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATg                                                                                  >  3:47415/1‑148 (MQ=255)                                                                    cTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAAt                                                                               <  2:320803/148‑1 (MQ=255)                                                                    cTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAAt                                                                               <  4:30259/148‑1 (MQ=255)                                                                     ttGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGTGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGc                                                                             <  3:260576/149‑1 (MQ=255)                                                                       gATATGGGCAGGCCTCGGTCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGcc                                                                            >  5:178159/1‑148 (MQ=255)                                                                       gATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGc                                                                             <  6:104469/147‑1 (MQ=255)                                                                         tatGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCctct                                                                         >  8:16478/1‑149 (MQ=255)                                                                            gggCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTcc                                                                       >  6:361257/1‑148 (MQ=255)                                                                              gCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAg                                                                    <  4:47415/149‑1 (MQ=255)                                                                                  gCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCt                                                                >  6:122165/1‑149 (MQ=255)                                                                                       ggCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGc                                                           <  3:65646/149‑1 (MQ=255)                                                                                          cTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGcccc                                                        <  7:16478/149‑1 (MQ=255)                                                                                             aTCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTg                                                      <  2:46667/148‑1 (MQ=255)                                                                                                gCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGtt                                                   <  6:178159/148‑1 (MQ=255)                                                                                                 cAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGACTCTCCCAGTGCTCCAGACCCTGGTTTc                                                 >  3:280338/1‑149 (MQ=255)                                                                                                   aaaTCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGa                                               <  7:152850/149‑1 (MQ=255)                                                                                                         tcCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTg                                           >  5:188391/1‑147 (MQ=255)                                                                                                         tcCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTg                                           >  5:129184/1‑147 (MQ=255)                                                                                                          cccTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTcc                                                                       <  4:217195/118‑1 (MQ=255)                                                                                                          cccTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTcc                                                                       >  3:217195/1‑118 (MQ=255)                                                                                                           ccTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTggag                                        >  2:268753/1‑148 (MQ=255)                                                                                                               ccATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAAc                                    <  1:338838/148‑1 (MQ=255)                                                                                                                cATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCAt                                                                                   <  2:315431/100‑1 (MQ=255)                                                                                                                cATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCAt                                                                                   >  1:315431/1‑100 (MQ=255)                                                                                                                cATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAAct                                   >  3:335492/1‑148 (MQ=255)                                                                                                                    aCCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAACTCTAcc                              >  2:203681/1‑149 (MQ=255)                                                                                                                    aCCAAACCGGGCAGCGTTGCATATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAACTCTAc                               >  6:342902/1‑148 (MQ=255)                                                                                                                    aCCAAACCGGGCAGCGTTGCATATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAACTCTAc                               <  5:342902/148‑1 (MQ=255)                                                                                                                      cAAACCGGGCAGCGTTGCTTATCGCAATtgcccggtttggtcatggcagggatgattttgcgatcaggccgaggcctgcccatatcaagcaactggtctgcgctttcagcctagcggtcacagtgaatccgggcaccca                                      >  7:229842‑M2/1‑28 (MQ=255)                                                                                                                      cAAACCGGGCAGCGTTGCTTATCGCAATtgcccggtttggtcatggcagggatgattttgcgatcaggccgaggcctgcccatatcaagcaactggtctgcgctttcagcctagcggtcacagtgaatccgggcaccca                                      <  8:229842‑M2/139‑112 (MQ=255)                                                                                                                      cAAACCGGGCAGCGTTGCTTATCGCAATtgcccggtttggtcatggcagggatgattttgcgatcaggccgaggcctgcccatatcaagcaactggtctgcgctttcagcctagcggtcacagtgaatccgg                                             >  8:293504‑M2/1‑28 (MQ=255)                                                                                                                      cAAACCGGGCAGCGTTGCTTATCGCAATtgcccggtttggtcatggcagggatgattttgcgatcaggccgaggcctgcccatatcaagcaactggtctgcgctttcagcctagcggtcacagtgaatccgg                                             <  7:293504‑M2/132‑105 (MQ=255)                                                                                                                       aaaCCGGGCAGCGTTGCTTATCGCAATtgcccggtttggtcatggcagggatgattttgcgatcaggccgaggcctgcccatatcaagcaactggtctgcgctttcagcctagcggtcacagtgaatccgggcacccagtgcacacagc                           <  1:55845‑M2/149‑123 (MQ=255)                                                                                                                        aaCCGGGCAGCGTTGCTTATCGCAATtgcccggtttggtcatggcagggatgattttgcgatcaggccgaggcctgcccatatcaagcaactggtctgcgctttcagcctagcggtcacagtgaatccgggcacccagtgcacacagc                           <  6:176079‑M2/148‑123 (MQ=255)                                                                                                                        aaCCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAACTCTACCGTTc                          >  5:89279/1‑149 (MQ=255)                                                                                                                                       cTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTc                                                 >  2:51497/1‑111 (MQ=255)                                                                                                                                       cTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTc                                                 >  2:56829/1‑111 (MQ=255)                                                                                                                                       cTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTc                                                 <  1:51497/111‑1 (MQ=255)                                                                                                                                       cTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTc                                                 <  1:56829/111‑1 (MQ=255)                                                                                                                                          aTCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAACTCTACCGTTCCCATCATGGCTGGATTCg        >  4:191406/1‑149 (MQ=255)                                                                                                                                           tCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAACTCTACCGTTCCCATCATTGCTGGATTCGc       >  3:269016/1‑149 (MQ=255)                                                                                                                                            cGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGAc                                              <  8:116140/109‑1 (MQ=255)                                                                                                                                            cGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGAc                                              >  7:116140/1‑109 (MQ=255)                                                                                                                                               aaTTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAACTCTACCGTTCCCATCATGGCTGGATTCGCCAGt   >  5:37811/1‑149 (MQ=255)                                                                                                                                                aTTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAACTCTACCGTTCCCATCATGGCTGGATTCGCCAGTg  <  4:335492/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    GTGTTCGCTGTGTGCACTGGGTGCCCGGATTCACTGTGACCGCTAGGCTGAAAGCGCAGACCAGTTGCTTGATATGGGCAGGCCTCGGCCTGATCGCAAAATCATCCCTGCCATGACCAAACCGGGCAGCGTTGCTTATCGCAATTGCCCGGTGTCATTCATCCACGCTACCATTGTGAATAATTCCTATTAGCATAATGGCCTGCCCCATGAATGCCTCTCCCAGTGCTCCAGCCCCTGGTTTCGACCTGGAGGAACTCTACCGTTCCCATCATGGCTGGATTCGCCAGTG  >  NC_002947/775153‑775444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.