| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1172783 = | 46 (0.780) | 3 (0.050) | 3/244 | NT | 7.0% | coding (270/1380 nt) | xseA | exodeoxyribonuclease 7 large subunit |
| ? | NC_002947 | 1172837 = | 36 (0.650) | coding (216/1380 nt) | xseA | exodeoxyribonuclease 7 large subunit | |||||
AGGCGAAATCTCCAACCTCGCCCGCCCGGCGTCCGGCCACATGTACTTCACCCTCAAGGACAGCGGCGCCCAGGTGCGTTGTGCGTTGTTCCGGCAGAACGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1172936‑1172783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtggcGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGTTGGAGATTTCGCCTTCCACCCACACGCTGCGGAAAACGTCTTCCAGCAGCACGCGGGCGCGG > NC_002947/1172837‑1172984 AGGCGAAATCTCCAACCTCGCCCGCCCGGCGTCCGGCCACATGTACTTCACCCTCAAGGACAGCGGCGCCCAGGTGCGTTGTGCGTTGTTCCGGCAGAACGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGC < 1:94708/149‑1AGGCGAAATCTCCAACCTCGCCCGCCCGGCGTCCGGCCACATGTACTTCACCCTCAAGGACAGCGGCGCCCAGGTGCGTTGTGCGTTGTTCCGGCAGAACGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGC < 2:39224/149‑1AGGCGAAATCTCCAACCTCGCCCGCCCGGCGTCCGGCCACATGTACTTCACCCTCAAGGACAGCGGCGCCCAGGTGCGTTGTGCGTTGTTCCGGCAGAACGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGC < 6:245867/149‑1 GCGAAATCTCCAACCTCGCCCGCCCGGCGTCCGGCCACATGTACTTCACCCTCAAGGACAGCGGCGCCCAGGTGCGTTGTGCGTTGTTCCGGCAGAACGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGT > 8:44895/1‑149 GAAATCTCCAACCTCGCCCGCCCGGCGTCCGGCCACATGTACTTCACCCTCAAGGACAGCGGCGCCCAGGTGCGTTGTGCGTTGTTCCGGCAGAACGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGG > 6:213043/1‑149 ACTTCACCCTCAAGGACAGCGGCGCCCAGGTGCGTTGTGCGTTGTTCCGGCAGAACGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTG > 7:116064/1‑108 ACTTCACCCTCAAGGACAGCGGCGCCCAGGTGCGTTGTGCGTTGTTCCGGCAGAACGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTG < 8:116064/108‑1 GAACGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGTTG > 2:76451/1‑146 CCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGG > 3:55401/1‑132 CCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGG < 4:55401/132‑1 GCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGTTGGAGATTTCGCCTTCCACCCACACGCTGCGGAAAACGTCTTCCAGCAGCACGCAGGCGCG < 2:261808/149‑1 CGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGTTGGAGATTTCGCCTTCCACCCACACGCTGCGGAAAACGTCTTCCAGCAGCACGCGGGCGCGG > 1:286414/1‑149 AGGCGAAATCTCCAACCTCGCCCGCCCGGCGTCCGGCCACATGTACTTCACCCTCAAGGACAGCGGCGCCCAGGTGCGTTGTGCGTTGTTCCGGCAGAACGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1172936‑1172783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtggcGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGTTGGAGATTTCGCCTTCCACCCACACGCTGCGGAAAACGTCTTCCAGCAGCACGCGGGCGCGG > NC_002947/1172837‑1172984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |