New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1172783 =	46 (0.780)	3 (0.050)	3/244	NT	7.0%	coding (270/1380 nt)	xseA	exodeoxyribonuclease 7 large subunit
	?	NC_002947	1172837 =	36 (0.650)					coding (216/1380 nt)	xseA	exodeoxyribonuclease 7 large subunit

GCTTCTTTCGTTCGGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGTTGGAGAT  >  NC_002947/1172635‑1172929                                                                                                                                                     |                                                                                                                                                   ccgcgcccgcgtgctgctggaagacgttttccgcagcgtgtgggtggaaggcgaaatctccaacctcgcccgcccggcgtccggccacatgtacttcaccctcaaggacagcggcgcccaggtgcgttgtgcgttgttccggcagaacg                                                                                                                                                    >  1:286414‑M1/149‑149 (MQ=255)  cgcgcctgcgtgctgctggaagacgttttccgcagcgtgtgggtggaaggcgaaatctccaacctcgcccgcccggcgtccggccacatgtacttcaccctcaaggacagcggcgcccaggtgcgttgtgcgttgttccggcagaacGc                                                                                                                                                   <  2:261808‑M1/2‑1 (MQ=255)     cttTCGTTCGGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGcc                                                                                                                                                  <  7:339508/147‑1 (MQ=255)       ttcgttcgGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCAcg                                                                                                                                               >  5:213043/1‑148 (MQ=255)           ttcgGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCAcgcaccc                                                                                                                                          <  1:151506/149‑1 (MQ=255)           ttcgGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCAcgcaccc                                                                                                                                          >  3:249704/1‑149 (MQ=255)              ggCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGACTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCAcgcacccgc                                                                                                                                        <  5:122893/148‑1 (MQ=255)                     aaCAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAACCCTTGCCACGCACCCGCACCGCCAg                                                                                                                                >  5:199610/1‑149 (MQ=255)                         gCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCg                                                                                                                            >  3:58144/1‑149 (MQ=255)                           cccTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCAcgcac                                                                                                                                            >  6:103149/1‑131 (MQ=255)                           cccTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCAcgcac                                                                                                                                            <  5:103149/131‑1 (MQ=255)                            ccTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTcg                                                                                                                         >  7:44895/1‑149 (MQ=255)                                  ccccGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAgc                                                                                                                   <  2:95959/149‑1 (MQ=255)                                    ccGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCAACGCACCCGCACCGCCAGGCCGTCGCGCAgcgc                                                                                                                 >  4:261685/1‑149 (MQ=255)                                      gAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTc                                                                                                                          >  1:84770/1‑138 (MQ=255)                                      gAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTc                                                                                                                          <  2:84770/138‑1 (MQ=255)                                      gAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCt                                                                                                               <  3:261685/149‑1 (MQ=255)                                                   aGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGt                                                                                                  >  2:356970/1‑149 (MQ=255)                                                    gggCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCAc                                                                                                                                                <  1:273763/102‑1 (MQ=255)                                                    gggCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCAc                                                                                                                                                >  2:273763/1‑102 (MQ=255)                                                    gggCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTg                                                                                                 >  2:71393/1‑149 (MQ=255)                                                     ggCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTgg                                                                                                >  6:159253/1‑149 (MQ=255)                                                      gCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGc                                                                                               <  5:159253/149‑1 (MQ=255)                                                        cTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTg                                                                                                 >  7:36810/1‑145 (MQ=255)                                                        cTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTg                                                                                                 <  8:36810/145‑1 (MQ=255)                                                         tCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGtt                                                                                            >  5:90583/1‑149 (MQ=255)                                                             caacctcgcccgcccggcgtccggccacatgtacttcaccctcaaggacagcggcgcccaggtgcgttgtgcgttgttccggcagaacGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTc                                                                                           >  2:76451‑M1/89‑146 (MQ=255)                                                              aGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCTAACAGCGAAACCTTGCCATGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGcc                                                                                       <  2:4569/149‑1 (MQ=255)                                                                  aGGCGCAGCGCGCCATCACCGGCTGGATCTACGGTGGCTATAATAAGCTGGTCGTCGCCACGCCCATCGAACAGCTAAACCTTGCCCCGCCCCCGCACCGCAAGGCGGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGaa                                                                                   <  2:265054/149‑1 (MQ=255)                                                                      gcAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGaacaac                                                                               <  1:356970/149‑1 (MQ=255)                                                                      ccgcccggcgtccggccacatgtacttcaccctcaaggacagcggcgcccaggtgcgttgtgcgttgttccggcagaacGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTgg                                                                                                >  3:55401‑M1/80‑132 (MQ=255)                                                                      ccgcccggcgtccggccacatgtacttcaccctcaaggacagcggcgcccaggtgcgttgtgcgttgttccggcagaacGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTgg                                                                                                <  4:55401‑M1/53‑1 (MQ=255)                                                                                     cGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCa                                                                                                                                 <  8:293389/84‑1 (MQ=255)                                                                                             tCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCt                                                        >  6:86107/1‑149 (MQ=255)                                                                                                      tCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGa                                                <  6:90583/148‑1 (MQ=255)                                                                                                             tAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAg                                        >  4:109360/1‑149 (MQ=255)                                                                                                             tAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAg                                        >  4:176149/1‑149 (MQ=255)                                                                                                              aaGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAg                                        >  2:347300/1‑148 (MQ=255)                                                                                                                gCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCt                                                        <  6:323329/130‑1 (MQ=255)                                                                                                                gCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCt                                                        >  5:323329/1‑130 (MQ=255)                                                                                                                gCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTa                                      >  3:343235/1‑148 (MQ=255)                                                                                                                gCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTAc                                     <  3:109360/149‑1 (MQ=255)                                                                                                                gCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTAc                                     <  3:176149/149‑1 (MQ=255)                                                                                                                 cTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACa                                    >  2:183766/1‑149 (MQ=255)                                                                                                                   ggTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCCCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACAtg                                  >  1:261808/1‑149 (MQ=255)                                                                                                                    gTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAggg                                             <  7:141666/137‑1 (MQ=255)                                                                                                                    gTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGACACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAggg                                             >  8:141666/1‑137 (MQ=255)                                                                                                                       gTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCTTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTgg                               <  4:249704/148‑1 (MQ=255)                                                                                                                       gTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGc                              <  1:347300/149‑1 (MQ=255)                                                                                                                       gTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGc                              >  8:103096/1‑149 (MQ=255)                                                                                                                                      gAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCTGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCcgggcgg                <  1:71393/148‑1 (MQ=255)                                                                                                                                       aaCAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCgggcgggc              <  7:103096/149‑1 (MQ=255)                                                                                                                                       aaCAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCgggcgggc              >  7:99355/1‑149 (MQ=255)                                                                                                                                            cGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGt         >  2:26044/1‑149 (MQ=255)                                                                                                                                                aCCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGTTGga     <  4:58144/149‑1 (MQ=255)                                                                                                                                                aCCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGTTGga     <  1:26044/149‑1 (MQ=255)                                                                                                                                                   ttGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGTTGGAGAt  >  2:267810/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCTTCTTTCGTTCGGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCACCCGCACCGCCAGGCCGTCGCGCAGCGCCTGGCGTACCCGCGTGGCGTTCTGCCGGAACAACGCACAACGCACCTGGGCGCCGCTGTCCTTGAGGGTGAAGTACATGTGGCCGGACGCCGGGCGGGCGAGGTTGGAGAT  >  NC_002947/1172635‑1172929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.