New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 120608350 (0.850)4 (0.070) 4/248 NT 8.3% coding (2918/3150 nt) PP_1058 hypothetical protein
?NC_002947 = 1206115 40 (0.710)coding (2886/3150 nt) PP_1058 hypothetical protein

CTGCAGGTAAGGCATGAGGATCGGTGCCATGCCCTTGAGCACCTGCACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1205932‑1206083
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCGCCACCTTCGTGTTCTTCCTTGGCGACAACCATTTCGGCACGCTGACCGCCTTCGTGCCGGGTCGCACGGCAGAAGCGTTCAAATTTACCTCGGCGCTGCCGGTGCAGGTGCT  <  NC_002947/1206115‑1205969
                                                                                                                                                                                                                                                                                                           
CTGCAGGTAAGGCATGAGGATCGGTGCCATGCCCTTGAGCACCTGCACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGG                                                                                                                                                        <  7:179995/149‑1
                    TCGGTGCCATGCCCTTGAGCACCTGCACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGGCCGGCTGATCGGCTCGC                                                                                                                                    >  4:3895/1‑149
                                      GCACCTGCACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGGCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCG                                                                                                                  >  7:58365/1‑149
                                             CACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGGCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCGCCACCT                                                                                                            <  3:3895/148‑1
                                                CGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGGCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCGCCACCTTCGT                                                                                                        <  8:58365/149‑1
                                                                                                                                                      GGCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCGCCACCTTCGTGTTCTTCCTTGGCGACAACCATTTCGGCACGCTGACCGCCTTCGTGCCGGGTCGCACGGCAGAAGCGTTCAAATTTACCTCGGCGCTGCCGGTGCAGGTGCT  >  3:281177/1‑149
                                                                                                                                                                                                                                                                                                           
CTGCAGGTAAGGCATGAGGATCGGTGCCATGCCCTTGAGCACCTGCACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1205932‑1206083
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCGCCACCTTCGTGTTCTTCCTTGGCGACAACCATTTCGGCACGCTGACCGCCTTCGTGCCGGGTCGCACGGCAGAAGCGTTCAAATTTACCTCGGCGCTGCCGGTGCAGGTGCT  <  NC_002947/1206115‑1205969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.