New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1206083 | 50 (0.850) | 4 (0.070) | 4/248 | NT | 8.3% | coding (2918/3150 nt) | PP_1058 | hypothetical protein |
? | NC_002947 | = 1206115 | 40 (0.710) | coding (2886/3150 nt) | PP_1058 | hypothetical protein |
CTGCAGGTAAGGCATGAGGATCGGTGCCATGCCCTTGAGCACCTGCACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1205932‑1206083 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCGCCACCTTCGTGTTCTTCCTTGGCGACAACCATTTCGGCACGCTGACCGCCTTCGTGCCGGGTCGCACGGCAGAAGCGTTCAAATTTACCTCGGCGCTGCCGGTGCAGGTGCT < NC_002947/1206115‑1205969 CTGCAGGTAAGGCATGAGGATCGGTGCCATGCCCTTGAGCACCTGCACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGG < 7:179995/149‑1 TCGGTGCCATGCCCTTGAGCACCTGCACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGGCCGGCTGATCGGCTCGC > 4:3895/1‑149 GCACCTGCACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGGCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCG > 7:58365/1‑149 CACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGGCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCGCCACCT < 3:3895/148‑1 CGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGGCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCGCCACCTTCGT < 8:58365/149‑1 GGCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCGCCACCTTCGTGTTCTTCCTTGGCGACAACCATTTCGGCACGCTGACCGCCTTCGTGCCGGGTCGCACGGCAGAAGCGTTCAAATTTACCTCGGCGCTGCCGGTGCAGGTGCT > 3:281177/1‑149 CTGCAGGTAAGGCATGAGGATCGGTGCCATGCCCTTGAGCACCTGCACCGGCAGCGCCGAGGTAAATTTGAACGCTTCTGCCGTGCGACCCGGCACGAAGGCGGTCAGCGTGCCGAAATGGTTGTCGCCAAGGAAGAACACGAAGGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1205932‑1206083 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggCCGGCTGATCGGCTCGCGCTCGCTGAACCGCACCGCCACCTTCGTGTTCTTCCTTGGCGACAACCATTTCGGCACGCTGACCGCCTTCGTGCCGGGTCGCACGGCAGAAGCGTTCAAATTTACCTCGGCGCTGCCGGTGCAGGTGCT < NC_002947/1206115‑1205969 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |