| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1508562 = | 52 (0.880) | 4 (0.070) | 4/252 | NT | 7.1% | coding (140/579 nt) | PP_1322 | lipoprotein |
| ? | NC_002947 | 1508615 = | 54 (0.940) | coding (87/579 nt) | PP_1322 | lipoprotein | |||||
GGGAGTGAAGAATGACCCCTATGCGCCTCGGCCTGATGGCCCTGACCCTGTGCCTGAGCGTCACCGGTTGCAGCTCGGTACTCACCTCTACCCGCAATTCGCCGATCGAGGACGATCGCGGCACGCGCACCATCGGCAGCAAGATCGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1508712‑1508562‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaATTGCGGGTAGAGGTGAGTACCGAGCTGCAACCGGTGACGCTCAGGCACAGGGTCAGGGCCATCAGGCCGAGGCGCATAGGGGTCATTCTTCACTCCCGAACAGTTGGCTGTCGATCAGATCGCA > NC_002947/1508615‑1508739 GGGAGTGAAGAATGACCCCTATGCGCCTCGGCCTGATGGCCCTGACCCTGTGCCTGAGCGTCACCGGTTGCAGCTCGGTACTCACCTCTACCCGCAATTCGCCGATCGAGGACGATCGCGGCACGCGCACCATCGGCAGCAAGATCGAC > 3:288912/1‑149GGGAGTGAAGAATGACCCCTATGCGCCTCGGCCTGATGGCCCTGACCCTGTGCCTGAGCGTCACCGGTTGCAGCTCGGTACTCACCTCTACCCGCAATTCGCCGATCGAGGACGATCGCGGCACGCGCACCATCGGCAGCAAGATCGAC > 4:169558/1‑149 CCGCAATTCGCCGATCGAGGACGATCGCGGCACGCGCACCATCGGCAGCAAGATCGACGAATTGCGGGTAGAGGTGAGTACCGAGCTGCAACCGGTGACGCTCAGGCACAGGGTCAGGGCCATCAGGCCGAGGCGCATAGGGGTCATTC > 6:73784/1‑149 CGCAATTCGCCGATCGAGGACGATCGCGGCACGCGCACCATCGGCAGCAAGATCGACGAATTGCGGGTAGAGGTGAGTACCGAGCTGCAACCGGTGACGCTCAGGCACAGGGTCAGGGCCATCAGGCCGAGGCGCATAGGGGTCATTCT > 4:143054/1‑149 CGCCGATCGAGGACGATCGCGGCACGCGCACCATCGGCAGCAAGATCGACGAATTGCGGGTAGAGGTGAGTACCGAGCTGCAACCGGTGACGCTCAGGCACAGGGTCAGGGCCATCAGGCCGAGGCGCATAGGGGTCATTCTTCACTC < 5:73784/148‑1 CACCATCGGCAGCAAGATCGACGAATTGCGGGTAGAGGTGAGTACCGAGCTGCAACCGGTGACGCTCAGGCACAGGGTCAGGGCCATCAGGCCGAGGCGCATAGGGGTCATTCTTCACTCCCGAACAGTTGGCTGTCGATCAGATCGCA < 3:143054/149‑1 GGGAGTGAAGAATGACCCCTATGCGCCTCGGCCTGATGGCCCTGACCCTGTGCCTGAGCGTCACCGGTTGCAGCTCGGTACTCACCTCTACCCGCAATTCGCCGATCGAGGACGATCGCGGCACGCGCACCATCGGCAGCAAGATCGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1508712‑1508562‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaATTGCGGGTAGAGGTGAGTACCGAGCTGCAACCGGTGACGCTCAGGCACAGGGTCAGGGCCATCAGGCCGAGGCGCATAGGGGTCATTCTTCACTCCCGAACAGTTGGCTGTCGATCAGATCGCA > NC_002947/1508615‑1508739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |