New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1687949	48 (0.820)	3 (0.050)	3/246	NT	6.5%	coding (555/912 nt)	ydcU	polyamine ABC transporter permease
	?	NC_002947	= 1687999	41 (0.730)					coding (505/912 nt)	ydcU	polyamine ABC transporter permease

ATCGAGCCGGCGGCGATGCCGGGGATCGACAGCGGCAGGATCACCTGCACGAAGGTTTGCCCTGGCCGGGCGCCCAGGTCGGCCGAAGCCTGCAGCAGCGACGGTGGCAAGCGCTCCAGCGAGGCCTGGATCGGCAGGATCATGAATGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1687797‑1687949 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcACGCTGTCGACTTCACACCTGGGGCGCTTCCTGGTGTTCGTGTACATCTGGCTGCCATTCATGATCCTGCCGATCCAGGCCTCGCTGGAGCGCTTGCCACCGTCGCTGCTGCAGGCTTCGGCCGACCTGGGCGCCCGGCCAGGGC  <  NC_002947/1687999‑1687855                                                                                                                                                                                                                                                                                                            ATCGAGCCGGCGGCGAAGCCGGGGATCGACAGCGGCAGGATCACCTGCACGAAGGTTTGCCCTGGCCGGGCGCCCAGGTCGGCCGAAGCCTGCAGCAGCGACGGTGGCAAGCGCTCCAGCGAGGCCTGGATCGGCAGGATCATGAATGG                                                                                                                                                       >  2:349331/1‑149     AGCCGGCGGCGATGCCGGGGATCGACAGCGGCAGGATCACCTGCACGAAGGTTTGCCCTGGCCGGGCGCCCAGGTCGGCCGAAGCCTGCAGCAGCGACGGTGGCAAGCGCTCCAGCGAGGCCTGGATCGGCAGGATCATGAATGGCAGC                                                                                                                                                   >  7:146743/1‑149                                                                   CGGGCGCCCAGGTCGGCCGAAGCCTGCAGCAGCGACGGTGGCAAGCGCTCCAGCGAGGCCTGGATCGGCAGGATCATGAATGGCAGCACGCTGTCGACTTCACACCTGGGGCGCTTCCTGGTGTTCGTGTACATCTGGCTGCCATTCAT                                                                                     <  4:312835/149‑1                                                                                                             AAGCGCTCCAGCGAGGCCTGGATCGGCAGGATCATGAATGGCAGCACGCTGTCGACTTCACACCTGGGGCGCTTCCTGGTGTTCGTGTACATCTGGCTGCCATT                                                                                        <  5:280173/104‑1                                                                                                             AAGCGCTCCAGCGAGGCCTGGATCGGCAGGATCATGAATGGCAGCACGCTGTCGACTTCACACCTGGGGCGCTTCCTGGTGTTCGTGTACATCTGGCTGCCATT                                                                                        >  6:280173/1‑104                                                                                                                                                    GGCAGCACGCTGTCGACTTCACACCTGGGGCGCTTCCTGGTGTTCGTGTACATCTGGCTGCCATTCATGATCCTGCCGATCCAGGCCTCGCTGGAGCGCTTGCCACCGTCGCTGCTGCAGGCTTCGGCCGACCTGGGCGCCCGGCCAGG    <  3:244480/149‑1                                                                                                                                                      CAGCACGCTGTCGACTTCACACCTGGGGCGCTTCCTGGTGTTCGTGTACATCTGGCTGCCATTCATGATCCTGCCGATCCAGGCCTCGCTGGAGCGCTTGCCACCGTCGCTGCTGCAGGCTTCGGCCGACCTGGGCGCCCGGCCAGGGC  <  7:297521/149‑1                                                                                                                                                        GCACGCTGTCGACTTCACACCTGGGGCGCTTCCTGGTGTTCGTGTACATCTGGCTGCCATTCATGATCCTGCCGATCCAGGCCTCGCTGGAGCGCTTGCCACCGTCGCTGCTGCAGGCTTCGGCCGACCTGGGCGCCCGGCCAGGG   <  3:327036/146‑1                                                                                                                                                        GCACGCTGTCGACTTCACACCTGGGGCGCTTCCTGGTGTTCGTGTACATCTGGCTGCCATTCATGATCCTGCCGATCCAGGCCTCGCTGGAGCGCTTGCCACCGTCGCTGCTGCAGGCTTCGGCCGACCTGGGCGCCCGGCCAGGG   >  4:327036/1‑146                                                                                                                                                                                                                                                                                                            ATCGAGCCGGCGGCGATGCCGGGGATCGACAGCGGCAGGATCACCTGCACGAAGGTTTGCCCTGGCCGGGCGCCCAGGTCGGCCGAAGCCTGCAGCAGCGACGGTGGCAAGCGCTCCAGCGAGGCCTGGATCGGCAGGATCATGAATGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1687797‑1687949 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcACGCTGTCGACTTCACACCTGGGGCGCTTCCTGGTGTTCGTGTACATCTGGCTGCCATTCATGATCCTGCCGATCCAGGCCTCGCTGGAGCGCTTGCCACCGTCGCTGCTGCAGGCTTCGGCCGACCTGGGCGCCCGGCCAGGGC  <  NC_002947/1687999‑1687855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.