New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2037947 | 48 (0.820) | 4 (0.070) | 4/236 | NT | 7.9% | noncoding (70/89 nt) | PP_mr27 | C4 ncRNA |
? | NC_002947 | = 2038002 | 49 (0.910) | noncoding (15/89 nt) | PP_mr27 | C4 ncRNA |
GACGCGGAGCAGGTCCAGGGTGGGGTTGCCGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGGTGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2037791‑2037947 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagtcgtacGCGGGCAGACTTCGGTCTGGCCGAGCTTTGTAGCTCCCTCGGTTTCTCACCCCGTGTACGACTGCCGCCCTGGTCCGTGAGAAAGATCTGCGTGGCAGTTCCACCTATCAGGAGCAACTACCATGAAAAACAACAACCAATCCCCC < NC_002947/2038002‑2037857 GACGCGGAGCAGGTCCAGGGTGGGGTTGCCGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGGTGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGG > 2:96609/1‑148 GACGCGGAGCAGGTCCAGGGTGGGGTTGCCGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGGTGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGG > 8:145139/1‑148 CGGAGCAGGTCCAGGGTGGGGTTGCCGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGGTGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTC < 7:138244/149‑1 GAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGGTGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACGCGGGCAGACTTCGGTCTGGCCGAGCTTTGTAGCTCCCTCGGTTTCTCACCCCGT > 6:140549/1‑149 TTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGGTGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACGCGGGCAGACTTCGGTCTGGCCGAGCTTTGTAGCTCCCTCGGTTTCTCACCCCGTGTACGACTG < 5:140549/149‑1 TTGCTCCTGATAGGTGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACGCGGGCAGACTTCGGTCTGGCCGAGCTTTGTAGCTCCCTCGGTTTCTCACCCCGTGTAC < 5:191204/121‑1 TTGCTCCTGATAGGTGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACGCGGGCAGACTTCGGTCTGGCCGAGCTTTGTAGCTCCCTCGGTTTCTCACCCCGTGTAC > 6:191204/1‑121 TACGCGGGCAGACTTCGGTCTGGCCGAGCTTTGTAGCTCCCTCGGTTTCTCACCCCGTGTACGACTGCCGCCCTGGTCCGTGAGAAAGATCTGCGTGGCAGTTCCACCTATCAGGAGCAACTACCATGAAAAACAACAACCAATCCCCC > 5:118707/1‑149 TACGCGGGCAGACTTCGGTCTGGCCGAGCTTTGTAGCTCCCTCGGTTTCTCACCCCGTGTACGACTGCCGCCCTGGTCCGTGAGAAAGATCTGCGTGGCAGTTCCACCTATCAGGAGCAACTACCATGAAAAACAACAACCAATCCCCC < 6:118707/149‑1 GACGCGGAGCAGGTCCAGGGTGGGGTTGCCGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGGTGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2037791‑2037947 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagtcgtacGCGGGCAGACTTCGGTCTGGCCGAGCTTTGTAGCTCCCTCGGTTTCTCACCCCGTGTACGACTGCCGCCCTGGTCCGTGAGAAAGATCTGCGTGGCAGTTCCACCTATCAGGAGCAACTACCATGAAAAACAACAACCAATCCCCC < NC_002947/2038002‑2037857 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |