New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2037947 | 48 (0.820) | 4 (0.070) | 4/236 | NT | 7.9% | noncoding (70/89 nt) | PP_mr27 | C4 ncRNA |
? | NC_002947 | = 2038002 | 49 (0.910) | noncoding (15/89 nt) | PP_mr27 | C4 ncRNA |
TCCAGGGTGGGGTTGCCGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGG > NC_002947/2037804‑2038094 | tCCAGGGTGGGGTTGCCGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACggg < 3:103418/149‑1 (MQ=255) aGGGTGGGGGTGCCGGCGTCGATGAACGTTTCGCTGCCCGCCGGGAGGCCGGGGGATTGGTTGGTGTTTTTCATGGGAGTTGCGCCTGATAGGTTCGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGt < 1:96609/149‑1 (MQ=255) ttGCCGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGa < 7:145139/149‑1 (MQ=255) gCCGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAg < 3:188230/148‑1 (MQ=255) ccGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAgg > 2:4661/1‑148 (MQ=255) ttCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTa > 4:74505/1‑149 (MQ=255) gAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGc > 6:14865/1‑149 (MQ=255) aTGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGATCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGAc > 5:140798/1‑149 (MQ=255) cTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACGAAGCTCGGCCAGACCGaa < 2:355354/149‑1 (MQ=255) tGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAg > 4:113529/1‑149 (MQ=255) gCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGt > 4:370461/1‑149 (MQ=255) cGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGGCGAGCTACAAAGCTCGGCCAGACCGaa < 1:4661/147‑1 (MQ=255) gaggGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACgcgggcagacttcggtctggccgagctttgtagctccctcggtttctcaccccgt > 6:140549‑M1/1‑94 (MQ=255) gggggATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCgta < 6:118707‑M2/149‑4 (MQ=255) gggggATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCgta > 5:118707‑M2/1‑146 (MQ=255) ttGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACgcgggcagacttcggtctggccgagctttgtagctccctcggtttctcaccccgtgtacgactg < 5:140549‑M1/149‑65 (MQ=255) gttgttgttTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCa < 5:14865/149‑1 (MQ=255) gttgttgttTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCa > 3:230402/1‑149 (MQ=255) ttgttgttTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑Ga < 7:300912/102‑1 (MQ=255) ttgttgttTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑Ga > 8:300912/1‑102 (MQ=255) ttgttgttTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCAt > 2:293404/1‑149 (MQ=255) gttgttTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGc > 4:273927/1‑115 (MQ=255) gttgttTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGc < 3:273927/115‑1 (MQ=255) ttgttTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCA‑GGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACa < 5:267406/149‑1 (MQ=255) gttTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACa < 3:370461/148‑1 (MQ=255) tttttCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAgg < 3:113529/149‑1 (MQ=255) tCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCaa < 4:230402/148‑1 (MQ=255) tCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCaa < 3:74505/148‑1 (MQ=255) tCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAg > 1:361103/1‑149 (MQ=255) ggTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAg > 8:26330/1‑149 (MQ=255) tAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGATCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGt < 6:140798/149‑1 (MQ=255) ttGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACgcgggcagacttcggtctggccgagctttgtagctccctcggtttctcaccccgtgtac > 6:191204‑M1/1‑62 (MQ=255) ttGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACgcgggcagacttcggtctggccgagctttgtagctccctcggtttctcaccccgtgtac < 5:191204‑M1/121‑60 (MQ=255) cTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGAc < 5:133203/130‑1 (MQ=255) cTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGAc > 6:133203/1‑130 (MQ=255) tCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCaa < 7:325084/135‑1 (MQ=255) tCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCaa > 8:325084/1‑135 (MQ=255) cTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCa > 8:194532/1‑148 (MQ=255) cTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCAt < 7:26330/149‑1 (MQ=255) gATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGCCCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCAt > 7:258438/1‑147 (MQ=255) gATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCAt > 1:109662/1‑147 (MQ=255) g‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGtt > 6:326044/1‑148 (MQ=255) ccACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTACCATGACAGGCAAGTCAGGt < 1:141004/124‑1 (MQ=255) ccACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTACCATGACAGGCAAGTCAGGt > 2:141004/1‑124 (MQ=255) gATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCAt < 6:63686/101‑1 (MQ=255) cTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTc < 8:78736/119‑1 (MQ=255) cTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTc > 7:78736/1‑119 (MQ=255) ttCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATg > 6:175287/1‑149 (MQ=255) ttCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACAGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGGCAGGTAGCTCGCATCAGGTTCTCACACCCGGGCACCAACATg > 7:312058/1‑149 (MQ=255) tcACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGc > 6:231345/1‑148 (MQ=255) tcACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGc > 1:147351/1‑148 (MQ=255) aCCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTtct < 6:216715/120‑1 (MQ=255) aCCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTtct > 5:216715/1‑120 (MQ=255) gggCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGAc < 5:231345/149‑1 (MQ=255) cAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCgtacgactgccgccctggtccgtgagaaagatctgcgtggcagttccacctatcaggagcaactaccatgaaaaacaacaaccaa < 5:140549‑M2/149‑86 (MQ=255) gTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATccc < 7:194532/149‑1 (MQ=255) gTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCgtacgactgccgccctggtccgtgagaaagatctgcgtggcagttccacctatcaggagcaa < 5:191204‑M2/121‑63 (MQ=255) gTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCgtacgactgccgccctggtccgtgagaaagatctgcgtggcagttccacctatcaggagcaa > 6:191204‑M2/1‑59 (MQ=255) tACgcgggcagacttcggtctggccgagctttgtagctccctcggtttctcaccccgtgtacgactgccgccctggtccgtgagaaagatctgcgtggcagttccacctatcaggagcaactaccatgaaaaacaacaaccaatccccc > 5:118707‑M1/1‑3 (MQ=255) tACgcgggcagacttcggtctggccgagctttgtagctccctcggtttctcaccccgtgtacgactgccgccctggtccgtgagaaagatctgcgtggcagttccacctatcaggagcaactaccatgaaaaacaacaaccaatccccc < 6:118707‑M1/149‑147 (MQ=255) acacGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAgg > 3:242842/1‑149 (MQ=255) | TCCAGGGTGGGGTTGCCGGCTTCGAGGAAGGTTTCGATGCCTGCGGTGAGGAGGGGGGATTGGTTGTTGTTTTTCATGGTAGTTGCTCCTGATAGG‑TGGAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGG‑GAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGG > NC_002947/2037804‑2038094 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |