New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2115901	57 (0.970)	3 (0.050)	3/244	NT	5.0%	coding (1421/1806 nt)	PP_1883	hypothetical protein
	?	NC_002947	= 2115920	60 (1.080)					coding (1440/1806 nt)	PP_1883	hypothetical protein

GCAGCCATCGTTCCCCGGCCGCCGTCAGGTGACACACGCCTGTTCACGGTGCCGCGGTCGGCCATGGCCGCCAATCTGGGTAGACGTCTGTGGGTGTACTACACCGTCACCCGCGCCGGCGAAACGCCACGCACATCAGAAAAGTTCGAGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2115747‑2115901 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgcgCTGATCGAAATCGCTTACCCGCAGCTCGAA  <  NC_002947/2115920‑2115891                                                                                                                                                                                           GCAGCCATCGTTCCCCGGCCGCCGTCAGGTGACACACGCCTGTTCACGGTGCCGCGGTCGGCCATGGCCGCCAATCTGGGTAGACGTCTGTGGGTGTACTACACCGTCACCCGCGCCGGCGAAACGCCACGCACATCAGAAAAGTTCGA                                      <  3:204429/149‑1           TTCCCCGGCCGCCGTCAGGTGACACACGCCTGTTCACGGTGCCGCGGTCGGCCATGGCCGCCAATCTGGGTAGACGTCTGTGGGTGTACTACACCGTCACCCGCGCCGGCGAAACGCCACGCACATCAGAAAAGTTCGA                                      <  5:207610/139‑1           TTCCCCGGCCGCCGTCAGGTGACACACGCCTGTTCACGGTGCCGCGGTCGGCCATGGCCGCCAATCTGGGTAGACGTCTGTGGGTGTACTACACCGTCACCCGCGCCGGCGAAACGCCACGCACATCAGAAAAGTTCGA                                      >  6:207610/1‑139                                     cggCTGTTCACGGTGCCGCGGTCGGCCATGGCCGCCAATCTGGGTAGACGTCTGTGGGTGTACTACACCGTCACCCGCGCCGGCGAAACGCCACGCACATCAGAAAAGTTCGAGCTGCGCTGATCGAAATCGCTTACCCGCAGCTCGAA  <  8:130566/146‑1                                                                                      GTCTGTGGGTGTACTACACCGTCACCCGCGCCGGCGAAACGCCACGCACATCAGAAAAGTTCGAGCTGCGCTGATCGAAATCGCTTACCCGC          <  1:317924/92‑1                                                                                      GTCTGTGGGTGTACTACACCGTCACCCGCGCCGGCGAAACGCCACGCACATCAGAAAAGTTCGAGCTGCGCTGATCGAAATCGCTTACCCGC          >  2:317924/1‑92                                                                                                                                                                                           GCAGCCATCGTTCCCCGGCCGCCGTCAGGTGACACACGCCTGTTCACGGTGCCGCGGTCGGCCATGGCCGCCAATCTGGGTAGACGTCTGTGGGTGTACTACACCGTCACCCGCGCCGGCGAAACGCCACGCACATCAGAAAAGTTCGAGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2115747‑2115901 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgcgCTGATCGAAATCGCTTACCCGCAGCTCGAA  <  NC_002947/2115920‑2115891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.