New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2180702	53 (0.900)	7 (0.130)	7/242	NT	12.3%	intergenic (‑147/‑77)	PP_1932/PP_1934	hypothetical protein/hypothetical protein
	?	NC_002947	= 2180718	50 (0.910)					intergenic (‑163/‑61)	PP_1932/PP_1934	hypothetical protein/hypothetical protein

CTGTCCCATTTGGCTTCCTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2180547‑2180702 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccgctCGCCCCGCGCTGAAAAAGCGGTCGTGAAGCTTTCGACCCGCGCACTGCGCCTGCGGCAATCGAGGCCTGAATCAGATGCAATCATCAGCGGGTTGATGAACGCGGTAAGATCTCCCCACAGAACATTTCAAGACCACGCTGAGCG  <  NC_002947/2180718‑2180574                                                                                                                                                                                                                                                                                                               CTGTCCCATTTGGCTTCCTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCAC                                                                                                                                                          >  2:271917/1‑149        ATTTGGCTTCCTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCT                                                                                                                                                   >  2:215132/1‑149              CTTCCTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTCGCCCC                                                                                                                                             >  8:177329/1‑149                                  GCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTCGCCCCGCGCTGAAAAAGCGGTCGTG                                                                                                                         <  7:177329/149‑1                                    GTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTCGCCCCGCGCTGAAAAAGCGGTCGTGAA                                                                                                                       <  6:267112/149‑1                                                                 TTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTCGCCCCGCGCTGAAAAAGCGGTCGT                                                                                                                          <  3:40112/117‑1                                                                 TTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTCGCCCCGCGCTGAAAAAGCGGTCGT                                                                                                                          >  4:40112/1‑117                                                                                                             CTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTCGCCCCGCGCTGAAAAAGCGGTC                                                                                                                            <  5:22794/71‑1                                                                                                             CTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTCGCCCCGCGCTGAAAAAGCGGTC                                                                                                                            >  6:22794/1‑71                                                                                                                                                     CGACCGCTCGCCCCGCGCTGAAAAAGCGGTCGTGAAGCTTTCGACCCACGCACTGCGCCTGCGGCAATCGAGGCCTGAATCAGATGCAATCATCAGCGGGTTGATGAACGCGGTAAGATCTCCCCACAGAACATTTCAAGAC             >  5:367490/1‑142                                                                                                                                                     CGACCGCTCGCCCCGCGCTGAAAAAGCGGTCGTGAAGCTTTCGACCCACGCACTGCGCCTGCGGCAATCGAGGCCTGAATCAGATGCAATCATCAGCGGGTTGATGAACGCGGTAAGATCTCCCCACAGAACATTTCAAGAC             <  6:367490/142‑1                                                                                                                                                      GACCGCTCGCCCCGCGCTGAAAAAGCGGTCGTGAAGCTTTCGACCCGCGCACTGCGCCTGCGGCAATCGAGGCCTGAATCAGATGCAATCATCAGCGGGTTGATGAACGCGGTAAGATCTCCCCACAGAACATTTCAAGACCACGCTGA     <  3:325097/149‑1                                                                                                                                                      GACCGCTCGCCCCGCGCTGAAAAAGCGGTCGTGAAGCTTTCGACCCGCGCACTGCGCCTGCGGCAATCGAGGCCTGAATCAGATGCAATCATCAGCGGGTTGATGAACGCGGTAAGATCTCCCCACAGAACATTTCAAGACCACGCTGA     <  8:145178/149‑1                                                                                                                                                         CGCTCGCCCCGCGCTGAAAAAGCGGTCGTGAAGCTTTCGCCCCGCGCACTGCGCCTGCGGCAATCGAGGCCTGAATCAGATGCAATCATCAGCGGGTTGATGAACGCGGTAAGATCTCCACACAGAACATTTCAAGACCACGCTGAGC   >  7:276693/1‑148                                                                                                                                                          GCTCGCCCCGCGCTGAAAAAGCGGTCGTGAAGCTTTCGACCCGCGCACTGCGCCTGCGGCAATCGAGGCCTGAATCAGATGCAATCATCAGCGGGTTGATGAACGCGGTAAGATCTCCCCACAGAACATTTCAAGACCACGCTGAGCG  >  1:215132/1‑148                                                                                                                                                          GCTCGCCCCGCGCTGAAAAAGCGGTCGTGAAGCTTTCGACCCGCGCACTGCGCCTGCGGCAATCGAGGCCTGAATCAGATGCAATCATCAGCGGGTTGATGAACGCGGTAAGATCTCCCCACAGAACATTTCAAGA              <  3:239372/136‑1                                                                                                                                                          GCTCGCCCCGCGCTGAAAAAGCGGTCGTGAAGCTTTCGACCCGCGCACTGCGCCTGCGGCAATCGAGGCCTGAATCAGATGCAATCATCAGCGGGTTGATGAACGCGGTAAGATCTCCCCACAGAACATTTCAAGA              >  4:239372/1‑136                                                                                                                                                                                                                                                                                                               CTGTCCCATTTGGCTTCCTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2180547‑2180702 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccgctCGCCCCGCGCTGAAAAAGCGGTCGTGAAGCTTTCGACCCGCGCACTGCGCCTGCGGCAATCGAGGCCTGAATCAGATGCAATCATCAGCGGGTTGATGAACGCGGTAAGATCTCCCCACAGAACATTTCAAGACCACGCTGAGCG  <  NC_002947/2180718‑2180574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.