New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 218070253 (0.900)7 (0.130) 7/242 NT 12.3% intergenic (‑147/‑77) PP_1932/PP_1934 hypothetical protein/hypothetical protein
?NC_002947 = 2180718 50 (0.910)intergenic (‑163/‑61) PP_1932/PP_1934 hypothetical protein/hypothetical protein

ATTTGGCTTCCTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAATGAGTA  >  NC_002947/2180554‑2180849
                                                                                                                                                    |                                                                                                                                                   
aTTTGGCTTCCTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCT                                                                                                                                                     >  2:215132‑M1/1‑149 (MQ=255)
      cTTCCTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTcgcccc                                                                                                                                               >  8:177329‑M1/1‑143 (MQ=255)
      cTTCCTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCa                                                                                                                                               <  1:271917/149‑1 (MQ=255)
         ccTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTc                                                                                                                                                >  2:40310/1‑145 (MQ=255)
         ccTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTc                                                                                                                                                <  1:40310/145‑1 (MQ=255)
           tCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGcgcg                                                                                                                                          >  7:193335/1‑149 (MQ=255)
             aaTGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCggg                                                                                                                                        >  2:53889/1‑149 (MQ=255)
               tGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCa                                                                                                                                               <  5:361719/140‑1 (MQ=255)
               tGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCa                                                                                                                                               >  6:361719/1‑140 (MQ=255)
                 cTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTAAGCGCGGGGc                                                                                                                                      >  1:365570/1‑147 (MQ=255)
                    cGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGagc                                                                                                                                  >  1:215132‑M2/1‑145 (MQ=255)
                     gCTCAGCGTGGTCTTGAAATGTTCTGTGTGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGGCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGagcg                                                                                                                                 >  7:276693‑M2/1‑144 (MQ=255)
                       tCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGagcggtc                                                                                                                              <  8:145178‑M2/149‑8 (MQ=255)
                       tCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGagcggtc                                                                                                                              <  3:325097‑M2/149‑8 (MQ=255)
                         aGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCgg                                                                                                                            <  2:365570/149‑1 (MQ=255)
                          gCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTcgccccgcgctgaaaaagcggtcgtg                                                                                                                           <  7:177329‑M1/149‑27 (MQ=255)
                            gTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTcgccccgcgctgaaaaagcggtcgtgaa                                                                                                                         <  6:267112‑M1/149‑29 (MQ=255)
                               gTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGTGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGagcggtcg                                                                                                                             <  6:367490‑M2/142‑9 (MQ=255)
                               gTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGTGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGagcggtcg                                                                                                                             >  5:367490‑M2/1‑134 (MQ=255)
                                tCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGagc                                                                                                                                  >  4:239372‑M2/1‑133 (MQ=255)
                                tCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGagc                                                                                                                                  <  3:239372‑M2/136‑4 (MQ=255)
                                    gAAATGTTCTGTGGGGAGATCTTAGCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCtt                                                                                                                    <  6:4895/146‑1 (MQ=255)
                                    gAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCggg                                                                                                                                        <  8:52937/126‑1 (MQ=255)
                                    gAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCggg                                                                                                                                        >  7:52937/1‑126 (MQ=255)
                                    gAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTcc                                                                                                                  <  4:325097/148‑1 (MQ=255)
                                           tCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCt                                                                                                           >  5:18187/1‑148 (MQ=255)
                                              gtgGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGcc                                                                                                                         >  8:151176/1‑131 (MQ=255)
                                                 gggAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGa                                                                                                    <  1:53889/149‑1 (MQ=255)
                                                  ggAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAg                                                                                                   >  7:347444/1‑149 (MQ=255)
                                                  ggAGATCTTACCGCGTTCATAAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAg                                                                                                   >  5:119870/1‑149 (MQ=255)
                                                       tCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATgg                                                                                              >  4:296508/1‑149 (MQ=255)
                                                         ttACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTcgccccgcgctgaaaaagcggtcgt                                                                                                                            <  3:40112‑M1/117‑26 (MQ=255)
                                                         ttACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTcgccccgcgctgaaaaagcggtcgt                                                                                                                            >  4:40112‑M1/1‑92 (MQ=255)
                                                         ttACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGAGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGcc                                                                                            >  7:186644/1‑149 (MQ=255)
                                                           aCCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATgg                                                                                              <  3:50754/145‑1 (MQ=255)
                                                            ccGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGCGCGAGCGGTCGGGCCGTCTTCCAACAGCTGACATGAGTATGTCCTAg                                                                                         >  8:171139/1‑149 (MQ=255)
                                                              gcgTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGc                                                                                        >  8:86861/1‑148 (MQ=255)
                                                                    atcaACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACt                                                                                  >  6:321027/1‑148 (MQ=255)
                                                                         cccGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGc                                                                            >  6:140564/1‑149 (MQ=255)
                                                                          ccGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGt                                                                                                  >  5:245644/1‑126 (MQ=255)
                                                                          ccGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGt                                                                                                  <  6:245644/126‑1 (MQ=255)
                                                                                atgatTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAAtt                                                                       <  6:119870/147‑1 (MQ=255)
                                                                                   atTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAg                                                                  >  6:51991/1‑149 (MQ=255)
                                                                                   atTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGGCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCa                                                                   <  7:145178/148‑1 (MQ=255)
                                                                                          cTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTg                                                           >  8:254408/1‑149 (MQ=255)
                                                                                             aTTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGgag                                                        <  5:321027/149‑1 (MQ=255)
                                                                                             aTTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGga                                                         <  5:51991/148‑1 (MQ=255)
                                                                                                cAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGAt                                                      <  8:193335/148‑1 (MQ=255)
                                                                                                    ccTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGtg                                                 <  6:18187/149‑1 (MQ=255)
                                                                                                     cTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTcgccccgcgctgaaaaagcggtc                                                                                                                              <  5:22794‑M1/71‑24 (MQ=255)
                                                                                                     cTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTcgccccgcgctgaaaaagcggtc                                                                                                                              >  6:22794‑M1/1‑48 (MQ=255)
                                                                                                        gATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTg                                                           >  1:166905/1‑135 (MQ=255)
                                                                                                        gATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTg                                                           <  2:166905/135‑1 (MQ=255)
                                                                                                              cGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCa                                                    <  1:272017/136‑1 (MQ=255)
                                                                                                              cGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCa                                                    >  2:272017/1‑136 (MQ=255)
                                                                                                               gCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCgag                                       >  1:192736/1‑148 (MQ=255)
                                                                                                               gCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCgag                                       >  5:62192/1‑148 (MQ=255)
                                                                                                                cAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTgg                                                          >  8:252634/1‑128 (MQ=255)
                                                                                                                cAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTgg                                                          <  7:252634/128‑1 (MQ=255)
                                                                                                                       aGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGTACCGAGAAGCAGATa                              <  6:73846/149‑1 (MQ=255)
                                                                                                                              gggTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGa                       <  3:296508/149‑1 (MQ=255)
                                                                                                                              gggTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGa                       <  7:254408/149‑1 (MQ=255)
                                                                                                                                   gAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCCAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTc                   >  7:192873/1‑148 (MQ=255)
                                                                                                                                    aaaGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCaa                 <  7:86861/149‑1 (MQ=255)
                                                                                                                                    aaaGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCaa                 >  5:3162/1‑149 (MQ=255)
                                                                                                                                     aaGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAAt                <  8:186644/149‑1 (MQ=255)
                                                                                                                                         ttCACGACCGCTTTTTCAGCGCGGGGCGagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaagatctccccacagaacatttcaagaccac            <  6:267112‑M2/149‑122 (MQ=255)
                                                                                                                                         ttCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTg                                                           >  4:143386/1‑102 (MQ=255)
                                                                                                                                         ttCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTg                                                           <  3:143386/102‑1 (MQ=255)
                                                                                                                                           cACGACCGCTTTTTCAGCGCGGGGCGagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaagatctccccacagaacatttcaagaccacgc          <  7:177329‑M2/149‑124 (MQ=255)
                                                                                                                                            aCGACCGCTTTTTCAGCGCGGGGCGagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaa                                         >  4:40112‑M2/1‑25 (MQ=255)
                                                                                                                                            aCGACCGCTTTTTCAGCGCGGGGCGagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaa                                         <  3:40112‑M2/117‑93 (MQ=255)
                                                                                                                                             cGACCGCTcgccccgcgctgaaaaagcggtcgtgaagctttcgacccacgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaagatctccccacagaacatttcaagac               >  5:367490‑M1/1‑8 (MQ=255)
                                                                                                                                             cGACCGCTcgccccgcgctgaaaaagcggtcgtgaagctttcgacccacgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaagatctccccacagaacatttcaagac               <  6:367490‑M1/142‑135 (MQ=255)
                                                                                                                                              gACCGCTcgccccgcgctgaaaaagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaagatctccccacagaacatttcaagaccacgctga       <  3:325097‑M1/149‑143 (MQ=255)
                                                                                                                                              gACCGCTcgccccgcgctgaaaaagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaagatctccccacagaacatttcaagaccacgctga       <  8:145178‑M1/149‑143 (MQ=255)
                                                                                                                                              gACCGCTTTTTCAGCGCGGGGCGagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgag                                                                                     <  5:22794‑M2/71‑49 (MQ=255)
                                                                                                                                              gACCGCTTTTTCAGCGCGGGGCGagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgag                                                                                     >  6:22794‑M2/1‑23 (MQ=255)
                                                                                                                                              gACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAAt       >  5:111256/1‑149 (MQ=255)
                                                                                                                                              gACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAAt       <  8:347444/149‑1 (MQ=255)
                                                                                                                                              gACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAAt       <  4:178684/149‑1 (MQ=255)
                                                                                                                                                ccGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAATGa     >  6:189470/1‑149 (MQ=255)
                                                                                                                                                ccGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCCAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAATGa     <  8:192873/149‑1 (MQ=255)
                                                                                                                                                 cGCTcgccccgcgctgaaaaagcggtcgtgaagctttcgccccgcgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaagatctccacacagaacatttcaagaccacgctgagc     >  7:276693‑M1/1‑4 (MQ=255)
                                                                                                                                                 cGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAATGAg    <  5:140564/149‑1 (MQ=255)
                                                                                                                                                 cGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAATGAg    >  1:108496/1‑149 (MQ=255)
                                                                                                                                                  gCTcgccccgcgctgaaaaagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaagatctccccacagaacatttcaagaccacgctgagcg    >  1:215132‑M1/1‑3 (MQ=255)
                                                                                                                                                  gCTcgccccgcgctgaaaaagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaagatctccccacagaacatttcaaga                <  3:239372‑M1/136‑134 (MQ=255)
                                                                                                                                                  gCTcgccccgcgctgaaaaagcggtcgtgaagctttcgacccgcgcactgcgcctgcggcaatcgaggcctgaatcagatgcaatcatcagcgggttgatgaacgcggtaagatctccccacagaacatttcaaga                >  4:239372‑M1/1‑3 (MQ=255)
                                                                                                                                                  gCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAATGAGt   <  2:108496/149‑1 (MQ=255)
                                                                                                                                                   cTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAATGAGTa  >  1:172442/1‑149 (MQ=255)
                                                                                                                                                   cTTTTTCAGCGCGGAGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGAAGATAAGCCGGATTTCAATGGTCCAAATGAGTa  >  8:56068/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ATTTGGCTTCCTCAATGCTTCGCTCAGCGTGGTCTTGAAATGTTCTGTGGGGAGATCTTACCGCGTTCATCAACCCGCTGATGATTGCATCTGATTCAGGCCTCGATTGCCGCAGGCGCAGTGCGCGGGTCGAAAGCTTCACGACCGCTTTTTCAGCGCGGGGCGAGCGGTCGGGCCGTCTTCCCACACCTGACATGAGTATGGCCTAGCTACACTGACGGCTAATTGCCAGTGACCTGGAGATCAGTGATGAACCGAGAAGCAGATAAGCCGGATTTCAATGGTCCAAATGAGTA  >  NC_002947/2180554‑2180849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.