| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2202174 = | 49 (0.830) | 3 (0.050) | 3/240 | NT | 6.1% | intergenic (+31/‑150) | PP_1946/PP_1947 | short‑chain dehydrogenase/reductase family oxidoreductase/hypothetical protein |
| ? | NC_002947 | 2202214 = | 47 (0.860) | intergenic (+71/‑110) | PP_1946/PP_1947 | short‑chain dehydrogenase/reductase family oxidoreductase/hypothetical protein | |||||
CAATTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2202326‑2202174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaggcgcaCTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGA > NC_002947/2202214‑2202317 CAATTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGG > 8:124019/1‑149 AATTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAACCACAAAACCAAATTTCATATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGACCTAGtc > 4:205285/1‑147 TTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCG > 4:95416/1‑148 AACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAAC < 7:13910/139‑1 AACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAAC > 8:13910/1‑139 TAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATA > 1:106919/1‑148 TATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCA < 3:259784/133‑1 TATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCA > 4:259784/1‑133 GGCGCACTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGA < 1:148810/110‑1 CAATTGAACTCTCCATTTATTGCAGTGGCAAAAAGTAGGCGGCAGACAGCGTGCAATAAATACCCACAGGTAAAAATCACAAAACCAAATTTCAGATCAAATAAAACTTATAGTGCGCCTAGCCTTACCAAGCAATGGCGAGAACTAGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2202326‑2202174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaggcgcaCTATAAGTTTTATTTGATCTGAAATTTGGTTTTGTGATTTTTACCTGTGGGTATTTATTGCACGCTGTCTGCCGCCTACTTTTTGCCACTGCAATAAATGGAGA > NC_002947/2202214‑2202317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |