New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2303118	105 (1.780)	6 (0.110)	6/238	NT	5.9%	intergenic (‑203/+92)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein
	?	NC_002947	= 2303178	96 (1.770)					intergenic (‑263/+32)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein

CGAAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2302961‑2303118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACC  <  NC_002947/2303178‑2303031                                                                                                                                                                                                                                                                                                                     CGAAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGT                                                                                                                                                               >  3:41869/1‑149      CGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCG                                                                                                                                                          <  3:317231/149‑1       GACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG                                                                                                                                                         >  8:185502/1‑149         CCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTAGGGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGG                                                                                                                                                        >  1:296176/1‑149         CCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGC                                                                                                                                                       <  5:376725/149‑1         CCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGG                                                                                                                                                        >  7:272031/1‑148          CCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGTGGGCA                                                                                                                                                      >  5:116886/1‑149          CCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG                                                                                                                                                         >  4:9677/1‑146          CCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG                                                                                                                                                         <  3:9677/146‑1                                 TTTCCCCGACAACAGCGATAGTTCGGCATAGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGTTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGACGGTGTTCTCTTGCATGCCCGCTCACACTGACAGCGTA                                                                                                                               >  3:15999/1‑149                                     CCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGC                                                                                                                                                           >  6:70037/1‑117                                     CCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGC                                                                                                                                                           <  5:70037/117‑1                                       CGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG                                                                                                                                                         >  6:303687/1‑117                                       CGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGG                                                                                                                                                         <  5:303687/117‑1                                       CGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCC                                                                                                                           >  2:118328/1‑147                                                        CGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCATACGGTGGTAGCTGCGCCGGTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTAC                                                                                                         <  1:118328/148‑1                                                               GCGCGTC‑TGGTAATTCCTAAGCGTTTTGATTATGAAGCATTGGGGTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGACGAGAACCTTGCGCCGTAACTGTGGGA                                                                                                 <  4:15999/149‑1                                                                                                    GCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG                                                                                                   <  4:129992/111‑1                                                                                                    GCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGG                                                                                                   >  3:129992/1‑111                                                                                                                                                       gaGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG          >  8:65743/3‑149                                                                                                                                                       TCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG          >  1:281111/1‑149                                                                                                                                                        CGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAG          <  8:182092/148‑1                                                                                                                                                         GCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGA        <  6:351851/149‑1                                                                                                                                                         GCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGG         >  1:129956/1‑148                                                                                                                                                         GCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACC                                                                            <  4:324565/81‑1                                                                                                                                                         GCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACC                                                                            >  3:324565/1‑81                                                                                                                                                          CGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAA       <  7:326900/149‑1                                                                                                                                                             GCATGCCCGCTCCCACTGACCGTGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTA    <  1:153668/149‑1                                                                                                                                                             GCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACC                                    <  4:352879/117‑1                                                                                                                                                             GCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACC                                    >  3:352879/1‑117                                                                                                                                                               ATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACC  >  3:104032/1‑149                                                                                                                                                                                                                                                                                                                     CGAAGCGACCCGGAAACGTTATCCGTGAGGTGTTTCCCCGACAACAGCGATAGTTCGGCAGCGCGCGTA‑GGGTAATTCCTAAGCGGGTTGATTCTGAAGCATTGGGTTGCAGGTTCAGAAATATCTTACGGTGGTAGCTGCGCCGGTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2302961‑2303118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAGCTACCACCGTAAGATATTTCTGAACCTGCAACCCAATGCTTCAGAATCAACCCGCTTAGGAATTACC  <  NC_002947/2303178‑2303031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.