| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2622970 | 53 (0.900) | 5 (0.090) | 4/250 | NT | 8.0% | coding (139/333 nt) | PP_5517 | hypothetical protein |
| ? | NC_002947 | = 2623016 | 63 (1.110) | coding (185/333 nt) | PP_5517 | hypothetical protein | |||||
CTGGAGGCGAGTCATGGCTGTCGATTGGAAAGGATTTATTGCGGTCGGTGCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2622819‑2622970‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgCCCGCTTGATCGCCGTCCTGGGCAACGGCCCCGAACGCGTCAAGGTCGCTCTGCT < NC_002947/2623016‑2622962 CTGGAGGCGAGTCATGGCTGTCGATTGGAAAGGATTTATTGCGGTCGGTGCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGA < 2:237918/149‑1CTGGAGGCGAGTCATGGCTGTCGATTGGAAAGGATTTATTGCGGTCGGTGCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGA < 4:141549/149‑1CTGGAGGCGAGTCATGGCTGTCGATTGGAAAGGATTTATTGCGGTCGGTGCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGA < 7:22126/149‑1 GAGGCGAGTCATGGCTGTCGATTGGAAAGGATTTATTGCGGTCGGTGCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGC < 3:173927/148‑1 AAGGATTTATTGCGGTCGGTGCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGCCCGCTTGATCGCCGTCCTGGGCAAC > 5:121835/1‑149 GCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGCCCGCTTGATCGCCGTCCTGGGCAACGGCCCCGAACGCGTCAAGGTCGCTCTGC < 3:322862/149‑1 CTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGCCCGCTTGATCGCCGTCCTGGGCAACGGCCCCGAACGCGTCAAGGTCGCTCTGCT < 6:121835/149‑1 CCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGCCCGCTTGATCGCCGTCCTGGGCAACGGCCCCGAACGCGTCAAGGTCGCTCTGC < 5:236570/143‑1 CCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGCCCGCTTGATCGCCGTCCTGGGCAACGGCCCCGAACGCGTCAAGGTCGCTCTGC > 6:236570/1‑143 CTGGAGGCGAGTCATGGCTGTCGATTGGAAAGGATTTATTGCGGTCGGTGCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2622819‑2622970‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgCCCGCTTGATCGCCGTCCTGGGCAACGGCCCCGAACGCGTCAAGGTCGCTCTGCT < NC_002947/2623016‑2622962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |