New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 262297053 (0.900)5 (0.090) 4/250 NT 8.0% coding (139/333 nt) PP_5517 hypothetical protein
?NC_002947 = 2623016 63 (1.110)coding (185/333 nt) PP_5517 hypothetical protein

GCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCGCT  >  NC_002947/2622868‑2623162
                                                                                                                                                     |                                                                                                                                                   
gCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCggg                                                                                                                                                     <  7:119869/149‑1 (MQ=255)
gCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCggg                                                                                                                                                     <  7:227310/149‑1 (MQ=255)
               ctccctTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTg                                                                                                                                                >  5:138969/1‑139 (MQ=255)
               ctccctTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTg                                                                                                                                                <  6:138969/139‑1 (MQ=255)
                tccctTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTtgt                                                                                                                                      >  2:278/1‑148 (MQ=255)
                 ccctTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTtgt                                                                                                                                      >  7:209248/1‑147 (MQ=255)
                  cctTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGa                                                                                                                                    <  5:132723/148‑1 (MQ=255)
                      cTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAg                                                                                                                               >  2:266332/1‑149 (MQ=255)
                             ttGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCt                                                                                                                        >  3:64771/1‑149 (MQ=255)
                                  cgcAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGTGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCAc                                                                                                                   <  4:215960/149‑1 (MQ=255)
                                       tGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAg                                                                                                              >  1:212780/1‑149 (MQ=255)
                                            agaCGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCgg                                                                                                         <  2:346869/149‑1 (MQ=255)
                                             gaCGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCggg                                                                                                        <  3:349398/149‑1 (MQ=255)
                                                gTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGAt                                                                                                     >  8:156886/1‑149 (MQ=255)
                                                gTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGAt                                                                                                     <  1:278/149‑1 (MQ=255)
                                                gTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGAGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGAt                                                                                                     >  7:169167/1‑149 (MQ=255)
                                                 tAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATg                                                                                                    >  2:278300/1‑149 (MQ=255)
                                                      tACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCgtgt                                                                                               >  3:125804/1‑149 (MQ=255)
                                                       aCAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGtgtg                                                                                              >  7:94620/1‑149 (MQ=255)
                                                       aCAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGtgtg                                                                                              >  8:52309/1‑149 (MQ=255)
                                                          aCGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAg                                                                                           <  1:266332/149‑1 (MQ=255)
                                                          aCGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAg                                                                                           <  6:113416/149‑1 (MQ=255)
                                                                 cATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTc                                                                                     >  6:359298/1‑148 (MQ=255)
                                                                   ttCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGa                                                                                                                                               >  6:42477/1‑88 (MQ=255)
                                                                   ttCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGa                                                                                                                                               <  5:42477/88‑1 (MQ=255)
                                                                     cccGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAAc                                                                                 <  7:156886/148‑1 (MQ=255)
                                                                         cAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAg                                                                                           <  3:206240/134‑1 (MQ=255)
                                                                         cAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAg                                                                                           >  4:206240/1‑134 (MQ=255)
                                                                         cAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAAt                                                                            <  5:359298/149‑1 (MQ=255)
                                                                             cTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTtgt                                                                                                                                      >  1:331691/1‑87 (MQ=255)
                                                                                  tttACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTAcgcg                                                                   <  2:212780/149‑1 (MQ=255)
                                                                                   ttACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTAcgcg                                                                   <  8:169167/148‑1 (MQ=255)
                                                                                   ttACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTAcgcg                                                                   <  7:52309/148‑1 (MQ=255)
                                                                                       tGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCAc                                                             >  3:186451/1‑149 (MQ=255)
                                                                                        gCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGgtg                                                                                        >  3:233240/1‑122 (MQ=255)
                                                                                        gCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGgtg                                                                                        <  4:233240/122‑1 (MQ=255)
                                                                                          aacaaGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCAcct                                                           >  1:272764/1‑149 (MQ=255)
                                                                                           acaaGCAGAGCGACCTTGACGCGTTCGGGTCCGTTGCCAAGGACGTCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGTGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCTGTCAccttc                                                         <  4:209097/149‑1 (MQ=255)
                                                                                             aaGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCAccttcct                                                       >  2:139967/1‑149 (MQ=255)
                                                                                              aGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGcgctctgcttgttgcagtaaacatagtctgcgggaatgacgccgttgtaacttacgtctcgccattgcgcccaagcaccagaagggagggtgag                                                       <  6:121835‑M2/149‑95 (MQ=255)
                                                                                              aGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCAccttcctt                                                      >  1:213895/1‑149 (MQ=255)
                                                                                               gCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGcgctctgcttgttgcagtaaacatagtctgcgggaatgacgccgttgtaacttacgtctcgccattgcgcccaagcaccagaagggagggtgagc                                                      <  3:322862‑M2/149‑96 (MQ=255)
                                                                                               gCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGcgctctgcttgttgcagtaaacatagtctgcgggaatgacgccgttgtaacttacgtctcgccattgcgcccaagcaccagaagggagg                                                            <  5:236570‑M2/143‑90 (MQ=255)
                                                                                               gCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGcgctctgcttgttgcagtaaacatagtctgcgggaatgacgccgttgtaacttacgtctcgccattgcgcccaagcaccagaagggagg                                                            >  6:236570‑M2/1‑54 (MQ=255)
                                                                                               gCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCAccttcctt                                                      >  4:185808/1‑148 (MQ=255)
                                                                                                   agCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCTGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTcc                                                                                    <  8:61842/115‑1 (MQ=255)
                                                                                                   agCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTcc                                                                                    >  7:61842/1‑115 (MQ=255)
                                                                                                       aCCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGt                                             >  3:162929/1‑149 (MQ=255)
                                                                                                            gACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTc                                         >  4:241401/1‑148 (MQ=255)
                                                                                                            gACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTc                                         >  3:304657/1‑148 (MQ=255)
                                                                                                            gACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTAGGGGATGCGTGTGGAGGTGTTCAAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTc                                         >  2:168505/1‑148 (MQ=255)
                                                                                                             aCGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGa                                       <  4:186451/149‑1 (MQ=255)
                                                                                                               gcgTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGa                                                                          <  4:26441/113‑1 (MQ=255)
                                                                                                               gcgTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGa                                                                          >  3:26441/1‑113 (MQ=255)
                                                                                                                  ttCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCt                                   >  3:3806/1‑148 (MQ=255)
                                                                                                                     ggggCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGTATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTcta                               >  1:308338/1‑149 (MQ=255)
                                                                                                                     ggggCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTcta                               >  6:216423/1‑149 (MQ=255)
                                                                                                                     ggggCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTcta                               <  3:185808/149‑1 (MQ=255)
                                                                                                                       ggCCGTTGCCCAGGACGGCGATCCAGCGGGCTCTGAACGGCGTGTGAGCCAGGGTCGCTGCCAAGTGTGTTCGGGGATGCGTGGGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGTGTGGTCGAGCCTTctact                             <  2:274769/149‑2 (MQ=255)
                                                                                                                       ggCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTctaca                             <  8:209248/149‑1 (MQ=255)
                                                                                                                        gCCGTTGCCGAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTctacac                            <  3:56298/149‑1 (MQ=255)
                                                                                                                           gTTGCCCAGGACGGCGATCAAGCGGGcgctctgcttgttgcagtaaacatagtctgcgggaatgacgccgttgtaacttacgtctcgccattgcgcccaagcaccagaagggagggtgagcgctacagcaccgaccgcaataaatcctt                          >  5:121835‑M2/1‑26 (MQ=255)
                                                                                                                                ccAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTctacac                            >  4:264302/1‑141 (MQ=255)
                                                                                                                                ccAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTctacac                            <  3:264302/141‑1 (MQ=255)
                                                                                                                                 cAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGGCACGTCAGTTCGGGGATGCGTGTGGATGTGTTCCAAGAGAATGAGTACGCTGTGAATTTCCTTTCTCCGTGTTGTCGAGCGTTCTAGAGCTAGACGaa                   <  4:125804/149‑1 (MQ=255)
                                                                                                                                    gACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGtt                >  2:338625/1‑149 (MQ=255)
                                                                                                                                     aCGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTGTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTc               <  8:94620/149‑1 (MQ=255)
                                                                                                                                     aCGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTc               <  4:64771/149‑1 (MQ=255)
                                                                                                                                       ggCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGt             <  2:358251/149‑1 (MQ=255)
                                                                                                                                         cGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGa           <  4:3806/149‑1 (MQ=255)
                                                                                                                                           gATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGa           <  1:278300/149‑1 (MQ=255)
                                                                                                                                               aaGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAg      >  8:143926/1‑149 (MQ=255)
                                                                                                                                                aGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTc               <  4:97189/139‑1 (MQ=255)
                                                                                                                                                aGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTc               >  3:97189/1‑139 (MQ=255)
                                                                                                                                                 gCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAgcg    >  5:17118/1‑149 (MQ=255)
                                                                                                                                                    ggCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCACt  >  5:196710/1‑148 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GCTGTAGCGCTCACCCTCCCTTCTGGTGCTTGGGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCGCT  >  NC_002947/2622868‑2623162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.