| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2780527 = | 46 (0.780) | 3 (0.050) | 3/250 | NT | 5.8% | coding (301/480 nt) | PP_2433 | hypothetical protein |
| ? | NC_002947 | 2780572 = | 52 (0.910) | coding (346/480 nt) | PP_2433 | hypothetical protein | |||||
GCAGCATTTCTTCGACCTGCGTGGTGCCTTGCTGGGTGGTGAGCATCTGCATCGGCGTCAGCCCCGAGAAGCGTTCCTTGGGCTTGGAAAGCCAGCGTTTGGCCTTGCCCGCTTCACCGAACACGGCCTCGGCCATGGCGGTGATGTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2780677‑2780527‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTT > NC_002947/2780572‑2780710 GCAGCATTTCTTCGACCTGCGTGGTGCCTTGCTGGGTGGTGAGCATCTGCATCGGCGTCAGCCCCGAGAAGCGTTCCTTGGGCTTGGAAAGCCAGCGTTTGGCCTTGCCCGCTTCACCGAACACGGCCTCGGCCATGGCGGTGATGTGG < 2:343262/149‑1 CAGCATTTCTTCGACCTGCGTGGTGCCTTGCTGGGTGGTGAGCATCTGCATCGGCGTCAGCCCCGAGAAGCGTTCCTTGGGCTTGGAAAGCCAGCGTTTGGCCTTGCCCGCTTCACCGAACACGGCCTCGGCCATGGCGGTGATGTGGG > 4:215066/1‑149 CCTTGCCCGCTTCACCGAACACGGCCTCGGCCATGGCGGTGATGTGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTC < 7:31119/115‑1 CCTTGCCCGCTTCACCGAACACGGCCTCGGCCATGGCGGTGATGTGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTC > 8:31119/1‑115 CCCGCTTCACCGAACACGGCCTCGGCCATGGCGGTGATGTGGGCAAGGCCAAACGCTGGCTTTCCACGCCCAAGGAACGCTTCTCGGGGTTGACGCCGATGCAGATGCGCACCACCCAGCAAGGCACCACGCAGGTCGAAGAACTGCTG > 7:336501/1‑149 gGATGTGGGCAAGGCCAACCGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGTTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTT < 8:336501/148‑1 GGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGT > 5:106462/1‑137 GGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGT < 6:106462/137‑1 GCAGCATTTCTTCGACCTGCGTGGTGCCTTGCTGGGTGGTGAGCATCTGCATCGGCGTCAGCCCCGAGAAGCGTTCCTTGGGCTTGGAAAGCCAGCGTTTGGCCTTGCCCGCTTCACCGAACACGGCCTCGGCCATGGCGGTGATGTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2780677‑2780527‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTT > NC_002947/2780572‑2780710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |