New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3023022	50 (0.850)	8 (0.140)	8/246	NT	15.0%	intergenic (+41/‑297)	PP_2638/dapA‑II	cellulose synthase operon protein C/4‑hydroxy‑tetrahydrodipicolinate synthase
	?	NC_002947	= 3023052	43 (0.770)					intergenic (+71/‑267)	PP_2638/dapA‑II	cellulose synthase operon protein C/4‑hydroxy‑tetrahydrodipicolinate synthase

TGACTATGCGCCTAGCCATGGCATGCTCTACCTGCGCTACCTGTTCGAACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3022870‑3023022 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcgGCGTGCCTGGTGTCAACCCTTGGCCCGCATCGCCCCGTGCAGGCGCGCCCCTTGCAACGCAGCGATTGCCGTCACCGCCACTCGCTGGAAGGCTCCAGCGGTGTCACCGGCAGGGCTAGGTTGCCTCGCCACGGTTCGAACAGG  <  NC_002947/3023052‑3022909                                                                                                                                                                                                                                                                                                           TGACTATGCGCCTAGCCATGGCATGCTCTACCTGCGCTACCTGTTCGAACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGG                                                                                                                                                      >  7:300953/1‑149  GACTATGCGCCTAGCCATGGCATGCTCTACCTGCGCTACCTGTTCGAACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGG                                                                                                                                                     >  7:226285/1‑149     TATGCGCCTAGCCATGGCATGCTCTACCTGCGCTACCTGTTCGAACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGC                                                                                                                                                   >  8:56423/1‑148                CCATGGCATGCTCTACCTGCGCTACCTGTTCGAACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGCGGCGTGCCTGGT                                                                                                                                       >  8:272514/1‑149                       ATGCTCTACCTGCGCTACCTGTTCGAACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGG                                                                                                                                                     <  4:330289/128‑1                                       ACCTGTTCGAACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGCGGCGTGCCTGGTGTCAACCCTTGGCCCGCATCGCC                                                                                                                <  7:272514/149‑1                                           GTTCGAACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGCGGCGTGCCTGGTGTCAACCCTTGGCCCGCATCGCCCCGT                                                                                                            >  2:301593/1‑149                                            TTCGAACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGCGGCGTGCCTGGTGTCAACCCTTGGCCCGCATCGCCCCGT                                                                                                            <  1:301593/148‑1                                                AACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGCGGCGTGCCTGGTGTCAACCCTTGGCCCGCATCGCCCC                                                                                                              <  7:348473/142‑1                                                AACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGCGGCGTGCCTGGTGTCAACCCTTGGCCCGCATCGCCCC                                                                                                              >  8:348473/1‑142                                                                                   CCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGCGGCGTGCCTGGTGTCAACCCTTGGCCCGCATCG                                                                                                                  <  1:234392/103‑1                                                                                   CCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGCGGCGTGCCTGGTGTCAACCCTTGGCCCGCATCG                                                                                                                  >  2:234392/1‑103                                                                                                                                                     GGGCGGCGTGCCTGGTGTCAACCCTTGGCCCGCATCGCCCCGTGCAGGCGCGCCGCTTTCAACGCTGAGCTTGCCGTCTCCGCCACTCGCTGGAAGGCTCGAGCGGTGTCACCGGCAGGGCTAGGTTGCCTCGCCACGGTTCGAACAGG  >  5:267149/1‑149                                                                                                                                                       GCGGCGTGCCTGGTGTCAACCCTTGGCCCGCATCGCCCCGTGCAGGCGCGCCCCTTGCAACGCAGCGATTGCCGTCACCGCCACTCGCTGGAAGGCTCCAGCGGTGTCACCGGCAGGGCTAGGTTGCCTCGCCACGGTTCGAACAGG  >  5:149854/1‑147                                                                                                                                                                                                                                                                                                           TGACTATGCGCCTAGCCATGGCATGCTCTACCTGCGCTACCTGTTCGAACCGTGGCGAGGCAACCTAGCCCTGCCGGTGACACCGCTGGAGCCTTCCAGCGAGTGGCGGTGACGGCAATCGCTGCGTTGCAAGGGGCGCGCCTGCACGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3022870‑3023022 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcgGCGTGCCTGGTGTCAACCCTTGGCCCGCATCGCCCCGTGCAGGCGCGCCCCTTGCAACGCAGCGATTGCCGTCACCGCCACTCGCTGGAAGGCTCCAGCGGTGTCACCGGCAGGGCTAGGTTGCCTCGCCACGGTTCGAACAGG  <  NC_002947/3023052‑3022909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.