New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3045182 = | 46 (0.780) | 6 (0.110) | 5/250 | NT | 11.6% | coding (724/969 nt) | pstC | phosphate ABC transporter permease |
? | NC_002947 | 3045215 = | 47 (0.820) | coding (757/969 nt) | pstC | phosphate ABC transporter permease |
ATCAGCACTTCGACCTCGTTCGGGCCGGCTTCCGGGAAGTTCAGCGCCAGCAGCGCCGCCAGGGTGTTGGCCGGTGCGAACAAGGACAGGGAAATGGTGTTGGCGTTGCCGACCAGCATGGCCAGCGCCATGGTTTCACCGAGTGCACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3045333‑3045182 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAGTGCTGATGTACGCGGCACTGGTACTGATGTTCATCA > NC_002947/3045215‑3045362 ATCAGCACTTCGACCTCGTTCGGGCCGGCTTCCGGGAAGTTCAGCGCCAGCAGCGCCGCCAGGGTGTTGGCCGGTGCGAACAAGGACAGGGAAATGGTGTTGGCGTTGCCGACCAGCATGGCCAGCGCCATGGTTTCACCGAGTGCACG > 8:128357/1‑149 AGCACTTCGACCTCGTTCGGGCCGGCTTCCGGGAAGTTCAGCGCCAGCAGCGCCGCCAGGGTGTTGGCCGGTGCGAACAAGGACAGGGAAATGGTGTTGGCGTTGCCGACCAGCATGGCCAGCGCCATGGTTTCACCGAGTGCACGGC < 4:258991/148‑1 CCAGCATGGCCAGCGCCATGGTTTCACCGAGTGCACGGCCATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTC > 4:305385/1‑148 AGCATGGCCAGCGCCATGGTTTCACCGAGTGCACGGCCATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGTCCCGAACGAGGTCGAA > 7:125936/1‑149 GCATGGCCAGCGCCATGGTTTCACCGAGTGCACGGCCATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAG > 4:336093/1‑149 GCATGGCCAGCGCCATGGTTTCACCGAGTGCACGGCCATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAG > 8:75789/1‑149 TGGCCAGCGCCATGGTTTCACCGAGTGCACGGCCATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAGTGC < 7:75789/149‑1 AGTGCACGGCCATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAGTGCTGATGTACGCGGCACTGGTACTG < 3:336093/149‑1 GCCATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAGTGCTGATGTACGCGGCACTGGTACTGATGTTCAT > 3:344802/1‑149 CCATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAGTGCTGATGTACGCGGCACTGGTACTGATGTTCATC < 1:169958/149‑1 CATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAGTGCTGATGTACGCGGCACTGGTACTGATGTTCATCA < 5:138534/149‑1 CATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAGTGCTGATGTACGCGGCACTGGTACTGATGTTCATCA > 5:152699/1‑149 ATCAGCACTTCGACCTCGTTCGGGCCGGCTTCCGGGAAGTTCAGCGCCAGCAGCGCCGCCAGGGTGTTGGCCGGTGCGAACAAGGACAGGGAAATGGTGTTGGCGTTGCCGACCAGCATGGCCAGCGCCATGGTTTCACCGAGTGCACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3045333‑3045182 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccATGCTGGTCGGCAACGCCAACACCATTTCCCTGTCCTTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAGTGCTGATGTACGCGGCACTGGTACTGATGTTCATCA > NC_002947/3045215‑3045362 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |