| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3077686 = | 46 (0.780) | 3 (0.050) | 3/246 | NT | 5.9% | coding (167/951 nt) | PP_2687 | hypothetical protein |
| ? | NC_002947 | 3077751 = | 51 (0.910) | coding (102/951 nt) | PP_2687 | hypothetical protein | |||||
CCGCTTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3077839‑3077686‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcatCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCGGTTCGCGAAAGCATGGCTCAGTCCTCCACCACCCAGGTGTCCTTGGTACCGCCGCCTTG > NC_002947/3077751‑3077897 CCGCTTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCG > 2:353980/1‑149CCGCTTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCG < 4:158162/149‑1 CTTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGG > 6:112043/1‑148 TTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCA > 6:67218/1‑149 TGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGC > 7:74122/1‑119 TGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGC < 8:74122/119‑1 TGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCATCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTATTCTGCACGCTCCAGGTAGCGGGACATCCAGTACACGTCG > 3:113048/1‑149 GCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCATCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGGTCCAGGTAGCGG > 5:320603/1‑120 GCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCATCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGG < 6:320603/120‑1 CATCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCGGTTCGCGAAAGCATGGCTCAGTCCTCCACCACCCAGGTGTCCTTGGTACCGCCGCCTT < 6:311740/149‑1 ATCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCGGTTCGCGAAAGCATGGCTCAGTCCTCCACCACCCAGGTGTCCTTGGTACCGCCGCCTTG > 5:86955/1‑149 CCGCTTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3077839‑3077686‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcatCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCGGTTCGCGAAAGCATGGCTCAGTCCTCCACCACCCAGGTGTCCTTGGTACCGCCGCCTTG > NC_002947/3077751‑3077897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |