| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3387771 | 42 (0.710) | 3 (0.050) | 3/242 | NT | 6.9% | coding (552/795 nt) | PP_2989 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | = 3387797 | 42 (0.760) | coding (578/795 nt) | PP_2989 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
GTGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3387617‑3387771‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcaCGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGC < NC_002947/3387797‑3387654 GTGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTG > 2:342608/1‑149GTGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTG > 4:126245/1‑149GTGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGACACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTG > 7:231628/1‑149 GCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCG < 3:126245/149‑1 TTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGC < 7:343663/123‑1 TTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGC > 8:343663/1‑123 tCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGG < 5:192922/148‑1 CGGCACGCGCCCAGATCTCGGTGCTGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGC < 5:183443/149‑1 CGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGC < 7:41213/149‑1 CGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGC > 8:85697/1‑149 CGGCACGCGACCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACAGATTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTCACAGAAACAGCACGAAGGCTTTGGAAGCGCCGTAGATGGACATTCCGAAaaccg > 6:192922/1‑142 GTGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3387617‑3387771‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcaCGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGC < NC_002947/3387797‑3387654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |