New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3654072	49 (0.830)	7 (0.120)	5/250	NT	13.7%	coding (561/1101 nt)	PP_3219	alkansulfonate monooxygenase
	?	NC_002947	= 3654130	41 (0.720)					coding (503/1101 nt)	PP_3219	alkansulfonate monooxygenase

CTTCCTCCTCGGTGGCCCCCAGGATCGGCCGCAGCGACAGGCTGAAGCGAATGTGCTGCTCACGCCCATGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3653921‑3654072 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAGTCGCGGCCAAGCATGCCGACGTCTACATGATGTGGGGCGAGCCGCTGGAGCAGGTGCGCGAACGCATCGCCCAGGTGCGCAAGGCCGCCGCTCGCCATGGGC  <  NC_002947/3654130‑3653984                                                                                                                                                                                                                                                                                                              CTTCCTCCTCGGTGGCCCCCAGGATCGGCCGCAGCGACAGGCTGAAGCGAATGTGCTGCTCACGCCCATGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCG                                                                                                                                                         <  8:122249/149‑1  TTCCTCCTCGGTGGCCCCCAGGATCGGCCGCAGCGACAGGCTGAAGCGAATGTGCTGCTCACGCCCATGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCGG                                                                                                                                                        >  4:34231/1‑149                                         GCTGAAGCGAATGTGCTGCTCACGCCCATGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCGGCAAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGC                                                                                                                >  6:143740/1‑149                                                 GAATGTGCTGCTCACGCCCATGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCGGCAAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAG                                                                                                        >  7:297555/1‑149                                                 GAATGTGCTGCTCACGCCCATGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCGGCAAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAG                                                                                                        >  7:303062/1‑149                                                   ATGTGCTGCTCACGCCCATGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCGGCATGCTTGGCCGCG‑ACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAGTC                                                                                                      <  3:34231/149‑1                                                                    ATGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCGGCAAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAGTCGCGGCCAAGCATGCCGA                                                                                     <  8:297555/149‑1                                                                    ATGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCGGCAAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAGTCGCGGCCAAGCATGCCGA                                                                                     <  8:303062/149‑1                                                                     TGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCGGCAAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAGTCGCGGCCAAGCATGCCGAC                                                                                    <  5:143740/149‑1                                                                                                                                                     GGCAAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAGTCGCGGCCAAGCATGCCGACGTCTACATGATGTGGGGCGAGCCGCTGGAGCAGGTGCGCGAACGCATCGCCCAGGTGCGCAAGGCCGCCGCTCGCCATGG    <  4:261824/149‑1                                                                                                                                                       CAAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAGTCGCGGCCAAGCATGCCGACGTCTACATGATGTGGGGCGAGCCGCTGGAGCAGGTGCGCGAACGCATCGCCCAGGTGCGCAAGGCCGCCGCTCGCCATGGGC  >  1:362219/1‑149                                                                                                                                                       CAAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAGTCGCGGCCAAGCATGCCGACGTCTACATGATGTGGGGCGAGCCGCTGGAGCAGGTGCGCGAACGCATCGCCCAGGTGCGCAAGGCCGCCGCTCGCCATGGGC  >  6:35316/1‑149                                                                                                                                                                                                                                                                                                              CTTCCTCCTCGGTGGCCCCCAGGATCGGCCGCAGCGACAGGCTGAAGCGAATGTGCTGCTCACGCCCATGGCGAGCGGCGGCCTTGCGCACCTGGGCGATGCGTTCGCGCACCTGCTCCAGCGGCTCGCCCCACATCATGTAGACGTCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3653921‑3654072 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaAGC‑TGCCGGTGTACTTCTCCGGCGCCTCGGACGCGGCGGTAGAAGTCGCGGCCAAGCATGCCGACGTCTACATGATGTGGGGCGAGCCGCTGGAGCAGGTGCGCGAACGCATCGCCCAGGTGCGCAAGGCCGCCGCTCGCCATGGGC  <  NC_002947/3654130‑3653984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.