| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4235852 = | 51 (0.870) | 4 (0.070) | 4/250 | NT | 8.0% | coding (921/936 nt) | catA‑I | catechol 1,2‑dioxygenase |
| ? | NC_002947 | 4235890 = | 43 (0.750) | coding (883/936 nt) | catA‑I | catechol 1,2‑dioxygenase | |||||
GCTGATCGGCGAACTGCGTTTTGTCGAGGATGCGGCGGCGGCGCGCGACCGCGGTGTGCAAGGCGAGCGCTTTGCCGAGCTGTCATTCGACTTCCGCTTGCAGGGTGCCAAGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4236002‑4235852‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCACA > NC_002947/4235890‑4236036 GCTGATCGGCGAACTGCGTTTTGTCGAGGATGCGGCGGCGGCGCGCGACCGCGGTGTGCAAGGCGAGCGCTTTGCCGAGCTGTCATTCGACTTCCGCTTGCAGGGTGCCAAGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGG > 3:61696/1‑149GCTGATCGGCGAACTGCGTTTTGTCGAGGATGCGGCGGCGGCGCGCGACCGCGGTGTGCAAGGCGAGCGCTTTGCCGAGCTGTCATTCGACTTCCGCTTGCAGGGTGCCAAGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGG > 8:91714/1‑149 CTGATCGGCGAACTGCGTTTTGTCGAGGATGCGGCGGCGGCGCGCGACCGCGGTGTGTAAGGCGAGCGCTTTGCCGAGCTGTCATTCGACTTCCGCTTGCAGGGTGCCAAGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGC < 5:58757/149‑1 GTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCG > 1:187146/1‑129 GTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCG < 2:187146/129‑1 GCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAG > 6:239627/1‑149 GCGCGAAGCCATCGGCCGCGGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTG < 5:239627/149‑1 GCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCA > 5:245737/1‑148 GCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCA > 7:122944/1‑148 GCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCA > 8:300687/1‑148 CGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCACA < 3:299946/149‑1 GCTGATCGGCGAACTGCGTTTTGTCGAGGATGCGGCGGCGGCGCGCGACCGCGGTGTGCAAGGCGAGCGCTTTGCCGAGCTGTCATTCGACTTCCGCTTGCAGGGTGCCAAGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4236002‑4235852‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCACA > NC_002947/4235890‑4236036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |