New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4235852 = | 51 (0.870) | 4 (0.070) | 4/250 | NT | 8.0% | coding (921/936 nt) | catA‑I | catechol 1,2‑dioxygenase |
? | NC_002947 | 4235890 = | 43 (0.750) | coding (883/936 nt) | catA‑I | catechol 1,2‑dioxygenase |
CGATTCTAGATCACCCGCCCCTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCACA > NC_002947/4235745‑4236036 | cGATTCTAGATCACCCGCCCCTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACtt < 1:47808/149‑1 (MQ=255) aTTCTAGATCACCCGCCCCTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTgg > 8:110954/1‑149 (MQ=255) ttCTAGATCACCCGCCCCTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCACCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGAGACTTgg > 6:365124/1‑148 (MQ=255) aGATCACCCGCCCCTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCAccc > 6:140050/1‑149 (MQ=255) aGATCACCCGCCCCTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCAccc > 6:165165/1‑149 (MQ=255) cccGCCCCTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAg > 7:132789/1‑149 (MQ=255) ccGCCCCTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGc > 3:4477/1‑149 (MQ=255) gCCCCTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCgg < 2:238719/149‑1 (MQ=255) ccccTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGa < 8:132789/149‑1 (MQ=255) cgaggatgcggcggcggcgcgcgaccgcggtgtgcaaggcgagcgctttgccgagctgtcattcgacttccgcttgcagggtgccaagtCGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGAc > 1:187146‑M1/90‑129 (MQ=255) cgaggatgcggcggcggcgcgcgaccgcggtgtgcaaggcgagcgctttgccgagctgtcattcgacttccgcttgcagggtgccaagtCGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGAc < 2:187146‑M1/40‑1 (MQ=255) cTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGt > 3:116991/1‑149 (MQ=255) tGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCTAACTCAGCCCTCCTGCAACGCCCGCGTCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGGAAGCGGAAGTc < 8:62783/149‑1 (MQ=255) cAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGa < 4:336364/149‑1 (MQ=255) cGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGc < 7:110954/149‑1 (MQ=255) cTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAgcg > 1:100117/1‑149 (MQ=255) ccccAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACcg < 4:116991/149‑1 (MQ=255) ggCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTc < 4:4477/149‑1 (MQ=255) cacaGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGcgccg > 3:78370/1‑149 (MQ=255) acaGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCACGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGcgccgc > 6:105594/1‑149 (MQ=255) gTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCt > 7:248252/1‑82 (MQ=255) gTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCt < 8:248252/82‑1 (MQ=255) aCATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGcgccgccgccgc < 4:78370/149‑1 (MQ=255) aCCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCt < 2:100117/149‑1 (MQ=255) ccTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAAt > 2:217164/1‑90 (MQ=255) ccTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTc < 5:355266/149‑1 (MQ=255) cTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCt < 2:119143/72‑1 (MQ=255) cTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCt > 1:119143/1‑72 (MQ=255) cTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGcgccgccgcc < 6:115047/140‑1 (MQ=255) cTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGcgccgccgcc > 5:115047/1‑140 (MQ=255) gAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGa < 5:140050/147‑1 (MQ=255) gAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATCACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACa < 8:59080/149‑1 (MQ=255) aGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAg < 3:222218/74‑1 (MQ=255) aGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAg > 4:222218/1‑74 (MQ=255) aGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACg > 3:229093/1‑148 (MQ=255) cccTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAg < 4:229093/149‑1 (MQ=255) tcatGCAACGCCCCCGGCCGATGTCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCCAATCACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACCCactac > 8:90218/4‑145 (MQ=255) gCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGcc > 7:91714/1‑148 (MQ=255) cAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTc < 1:160274/129‑1 (MQ=255) cAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTc > 2:160274/1‑129 (MQ=255) cAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGcc < 5:165165/147‑1 (MQ=255) gtcgcctgacgccgaggcgcgaagccatcggccgcgggcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCg > 1:187146‑M2/41‑129 (MQ=255) gtcgcctgacgccgaggcgcgaagccatcggccgcgggcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCg < 2:187146‑M2/89‑1 (MQ=255) aCGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGAt > 4:299946/1‑148 (MQ=255) gcctgacgccgaggcgcgaagccatcggccgcgggcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAg > 6:239627‑M2/38‑149 (MQ=255) GCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTACACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAg < 5:58757‑M1/149‑1 (MQ=255) CCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGc > 8:91714‑M1/1‑149 (MQ=255) CCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGc > 3:61696‑M1/1‑149 (MQ=255) gATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCgg > 6:194829/1‑149 (MQ=255) gcgcgaagccatcggccgcgggcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTg < 5:239627‑M2/125‑1 (MQ=255) gCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTg < 5:105594/148‑1 (MQ=255) ttCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCa > 7:2150/1‑149 (MQ=255) gcCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGCTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGc < 5:365124/149‑1 (MQ=255) aGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGTCCGTCGCGGGTGGCATAGGCAAAGTCGTcc > 8:77662/1‑148 (MQ=255) aGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAgg > 3:243261/1‑137 (MQ=255) aGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAgg < 4:243261/137‑1 (MQ=255) gcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCca > 7:122944‑M2/4‑148 (MQ=255) gcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCca > 8:300687‑M2/4‑148 (MQ=255) gcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCca > 5:245737‑M2/4‑148 (MQ=255) cgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCcaca < 3:299946‑M2/147‑1 (MQ=255) | CGATTCTAGATCACCCGCCCCTGGCGACAAAAAGCCCGAGGCCTCCCCGCACGGAAAGCCCCAGGCAAAATCACAGTGACATAACCTCGAACTCAGCCCTCCTGCAACGCCCGCGGCCGATGGCTTCGCGCCTCGGCGTCAGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCACA > NC_002947/4235745‑4236036 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |