New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 465555949 (0.830)4 (0.070) 4/248 NT 7.7% coding (454/696 nt) PP_4118 membrane protein
?NC_002947 = 4655583 49 (0.870)coding (478/696 nt) PP_4118 membrane protein

GCTTACCTGCGCGGCTATTGCGGCATTACCCTGCGCCCCGCCCTGCCCGCACTGATCTTCAGCGCAATCACTGGCATCGCGCTGCTCGGCGTACTGGCCAGCAACGGCCTCGGCCCGTTGCTGATCCCGGTAGCACTCTACGCCCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4655409‑4655559
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaGTGCGCGCCAGAGCATGGCGCTGATGGCCAGGGCGTAGAGTGCTACCGGGATCAGCAACGGGCCGAGGCCGTTGCTGGCCAGTACGCCGAGCAGCGCGATGCCAGTGATTGCGCTGAAGATCAGTGCGGGCAGGGCGGGGCGCAG  <  NC_002947/4655583‑4655439
                                                                                                                                                                                                                                                                                                        
GCTTACCTGCGCGGCTATTGCGGCATTACCCTGCGCCCCGCCCTGCCCGCACTGATCTTCAGCGCAATCACTGGCATCGCGCTGCTCGGCGTACTGGCCAGCAACGGCCTCGGCCCGTTGCTGATCCCGGTAGCACTCTACGCCCTG                                                                                                                                                       <  6:365078/147‑1
 CTTACCTGCGCGGCTATTGCGGCATTACCCTGCGCCCCGCCCTGCCCGCACTGATCTTCAGCGCAATCACTGGCATCGCGCTGCTCGGCGTACTGGCCAGCAACGGCCTCGGCCCGTTGCTGATCCCGGTAGCACTCTACGCCCTGGC                                                                                                                                                     >  5:86788/1‑148
                                    CCCGCCCTGCCCGCACTGATCTTCAGCGCAATCACTGGCATCGCGCTGCTCGGCGTACTGGCCAGCAACGGCCTCGGCCCGTTGCTGATCCCGGTAGCACTCTACGCCCTGGCCAGTGCGCGCCAGAGCATGGCGCTGATGGCCA                                                                                                                     <  5:122825/145‑1
                                    CCCGCCCTGCCCGCACTGATCTTCAGCGCAATCACTGGCATCGCGCTGCTCGGCGTACTGGCCAGCAACGGCCTCGGCCCGTTGCTGATCCCGGTAGCACTCTACGCCCTGGCCAGTGCGCGCCAGAGCATGGCGCTGATGGCCA                                                                                                                     >  6:122825/1‑145
                                                               GCAATCACTGGCATCGCGCTGCTCGGCGTACTGGCCAGCAACGGCCTCGGCCCGTTGCTGATCCCGGTAGCACTCTACGCCCTGGCCAGTGCGCGCCAGAGCATGGCGCTGATGGCCAGGGC                                                                                                                 >  7:349244/1‑122
                                                               GCAATCACTGGCATCGCGCTGCTCGGCGTACTGGCCAGCAACGGCCTCGGCCCGTTGCTGATCCCGGTAGCACTCTACGCCCTGGCCAGTGCGCGCCAGAGCATGGCGCTGATGGCCAGGGC                                                                                                                 <  8:349244/122‑1
                                                                                                                                                   GCCAGTGCGCGCCAGAGCATGGCGCTGATGGCCAGGGCGTAGAGTGCTACCGGGATCAGCAACGGGCCGAGGCCGTTGCTGGCCAGTACGCCGAGCAGCGCGATGCCAGTGATTGCGCTGAAGATCAGTGCGGGCAGGGCGGGGCGCAG  <  4:320073/149‑1
                                                                                                                                                     CAGTGCGCGCCAGAGCATGGCGCTGATGGCCAGGGCGTAGAGTGCTACCGGGATCAGCAACGGGCCGAGGCCGTTGCTGGCCAGTACGCCGAGCAGCGCGATGCCAGTGA                                       >  5:121657/1‑110
                                                                                                                                                     CAGTGCGCGCCAGAGCATGGCGCTGATGGCCAGGGCGTAGAGTGCTACCGGGATCAGCAACGGGCCGAGGCCGTTGCTGGCCAGTACGCCGAGCAGCGCGATGCCAGTGA                                       <  6:121657/110‑1
                                                                                                                                                                                                                                                                                                        
GCTTACCTGCGCGGCTATTGCGGCATTACCCTGCGCCCCGCCCTGCCCGCACTGATCTTCAGCGCAATCACTGGCATCGCGCTGCTCGGCGTACTGGCCAGCAACGGCCTCGGCCCGTTGCTGATCCCGGTAGCACTCTACGCCCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4655409‑4655559
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaGTGCGCGCCAGAGCATGGCGCTGATGGCCAGGGCGTAGAGTGCTACCGGGATCAGCAACGGGCCGAGGCCGTTGCTGGCCAGTACGCCGAGCAGCGCGATGCCAGTGATTGCGCTGAAGATCAGTGCGGGCAGGGCGGGGCGCAG  <  NC_002947/4655583‑4655439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.